CAZyme Information

Basic Information
SpeciesVitis vinifera
Cazyme IDGSVIVT01013608001
FamilyCBM57
Protein PropertiesLength: 995 Molecular Weight: 110807 Isoelectric Point: 6.4692
ChromosomeChromosome/Scaffold: Start: 1284866 End: 1301072
DescriptionLeucine-rich repeat transmembrane protein kinase
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM574155818.7e-30
  SIKCGGPEVIMPDGMVYEADNSISSTASTSFHESRSEKWAVSNVGLYVDKIANTTSQVNGTNTPELFKTSRISPGSLRYYGLGLQNGPYIVSLQFAEMLF
  KDPSTRTWESTGRRVFDIYIQGIRLERDFDISKEAGGVQRAVVRKFHATVSKNYLEIHLLWAGKGTC
Full Sequence
Protein Sequence     Length: 995     Download
MNYRMKLCAF SFFLLLLFQK SPAQNATLDP SEVETLNFLF NKWNMTSTEF WNMSGDPCSG    60
PPITPSQYDD IYYKQAIKCN CTFNDNTTCH ISHLKVLNLN KTGSIPKELT ALTFLSDLRL    120
DKNYFTGPLP SFIANLSRMQ FIDVGHNALS GTIPKELGNL KELLMLAIGS NNFSGTLPPE    180
LGNLPKLELI FIDSSGVGGE IPSTFVKLKN MREMFLSDTP LTGKIPDFIG NWTKLKRLRI    240
QGNSFEGPIP STFSQLISME SLRISDLANV SSSLDFIKDM KNLTDLVLRN TLISGSIPSY    300
IEEYRSLETL DLSFNNITGR IPKALFNMNN LTALFLGNNS FYGPLPEEKS DKLQTIDLSY    360
NEISGGFPTW IDPTLRLNLV ANNFVFDNTN KTIFEGLDCL QRNFPCNTSR YTNVSIKCGG    420
PEVIMPDGMV YEADNSISST ASTSFHESRS EKWAVSNVGL YVDKIANTTS QVNGTNTPEL    480
FKTSRISPGS LRYYGLGLQN GPYIVSLQFA EMLFKDPSTR TWESTGRRVF DIYIQGIRLE    540
RDFDISKEAG GVQRAVVRKF HATVSKNYLE IHLLWAGKGT CCIPFEGYYG PSISALSVVS    600
GITLERYNTG FIAGIAVVAG IVCFILVCAV FYIQRRGSNV NEEIELLEIG PRPNTFSYAE    660
LRTATGNFNP TNKLGEGGFG VVFKGTLLDG RAIAVKDLMV ASQQGKSQFI AEIATISAVQ    720
HRNLVKLHGF CIKENKRLLV YEYLENKSLD HALFGKIDLH LDWPTRYNIC LGTARGLAYL    780
HEESRPRIVH RDVKASNILL DAELCPKISD FGLAKLYDDK KTHISTRVAG TIGYLAPEYA    840
MRGHLTEKAD VFGFGVVALE ILSGRPNTDN SLDAKKMYLL EWAWTLHENN QSMDLVDPTL    900
TEFDENEVNR VMRVALLCTQ GSPMLRPTMS RVVAMLVGDV EVSAVTSKPS YLTDWHYNDI    960
TNSFLSENTQ TSTASTSMTD QVPSPVLHIE PILR* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
smart00220S_TKc1.0e-41672866197+
cd00180PKc6.0e-45674861192+
smart00221STYKc7.0e-46673863197+
smart00219TyrKc3.0e-46673863197+
pfam11721Malectin2.0e-55412596187+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005515protein binding
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCBI20535.1019941994unnamed protein product [Vitis vinifera]
EMBLCBI20543.10949934908unnamed protein product [Vitis vinifera]
EMBLCBI20543.10.00032593691113unnamed protein product [Vitis vinifera]
EMBLCBI39037.1059931995unnamed protein product [Vitis vinifera]
RefSeqXP_002271607.10339949951PREDICTED: hypothetical protein [Vitis vinifera]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3ulz_A0656939203091 Chain 1, E. Coli (Lacz) Beta-Galactosidase (R599a)
PDB3uim_A065693920309A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation
PDB3tl8_H065693928317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_G065693928317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB3tl8_D065693928317B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Transmembrane Domains
StartEnd
611633
Signal Peptide
Cleavage Site
23
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DT5531062866519360
DT5569162766849590
ES8151632956979890
CO0975152676499150
ES815163446556980.000000005
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_030_00368.2Aquca_030_00368.1
Arabidopsis lyrata883240.424.594883240.424.594892639892640892638
Arabidopsis thalianaAT1G56130.1AT1G56140.1AT1G56120.1AT1G56145.2AT1G56145.1
Brachypodium distachyonBradi5g21870.2Bradi5g21857.1Bradi3g17756.2Bradi3g17756.1Bradi1g48230.1
Brassica rapaBra003333Bra007909Bra007908Bra030813Bra030815
Bra033670Bra035966Bra033958Bra007907Bra016226
Carica papayaevm.model.supercontig_2207.1evm.model.supercontig_748.4
Capsella rubellaCarubv10008172mCarubv10012587mCarubv10010895mCarubv10008256mCarubv10008071m.409.563
Carubv10008071m.409.563Carubv10008183m
Citrus clementinaCiclev10007054mCiclev10007687mCiclev10007686mCiclev10018029mCiclev10018038m
Ciclev10014641mCiclev10014117m
Citrus sinensisorange1.1g001658morange1.1g008072morange1.1g006515morange1.1g006206morange1.1g004413m
orange1.1g002562morange1.1g002581morange1.1g038019m
Cucumis sativusCucsa.239700.2Cucsa.239700.1
Eucalyptus grandisEucgr.F04434.2Eucgr.F04434.1Eucgr.F04306.1Eucgr.F04441.1Eucgr.F02391.1
Eucgr.F04436.1Eucgr.C02767.1Eucgr.L01594.1Eucgr.F04301.1Eucgr.L01787.1
Eucgr.B01468.1Eucgr.F04437.1
Fragaria vescamrna11624.1-v1.0-hybridmrna16334.1-v1.0-hybridmrna30033.1-v1.0-hybridmrna28048.1-v1.0-hybrid
Glycine maxGlyma09g15200.3Glyma09g15200.2Glyma09g15200.1Glyma08g25590.2Glyma08g25600.2
Glyma08g25600.1
Gossypium raimondiiGorai.002G105800.1Gorai.001G034000.1Gorai.011G052100.1Gorai.N011200.1Gorai.011G052400.2
Gorai.011G052400.1Gorai.001G131900.1Gorai.006G091400.1Gorai.011G052300.5Gorai.011G052300.4
Gorai.011G052300.3Gorai.011G052300.2Gorai.011G052300.1Gorai.011G052000.1Gorai.011G052600.8
Gorai.011G052600.7Gorai.011G052600.6Gorai.011G052600.5Gorai.011G052600.4Gorai.011G052600.3
Gorai.011G052600.2Gorai.011G052600.1
Linum usitatissimumLus10031199
Malus domesticaMDP0000210289MDP0000183693.203.372MDP0000183693.203.372MDP0000213902MDP0000251746
MDP0000269684MDP0000267728MDP0000281046MDP0000207688MDP0000183693.772.939
MDP0000183693.772.939MDP0000389758MDP0000278907MDP0000306337MDP0000384033
MDP0000171164MDP0000307776MDP0000212717MDP0000311945MDP0000308237
MDP0000283397MDP0000122720
Manihot esculentacassava4.1_001509mcassava4.1_001407mcassava4.1_025733mcassava4.1_030674m
Mimulus guttatusmgv1a002601mmgv1a018669mmgv1a000612m
Oryza sativaLOC_Os04g22470.1LOC_Os08g10300.1LOC_Os08g10290.1LOC_Os04g52640.3LOC_Os04g52640.2
LOC_Os04g52640.1LOC_Os04g52600.1LOC_Os04g52630.1LOC_Os05g17810.1LOC_Os04g52614.1
LOC_Os08g10330.1LOC_Os05g17604.6LOC_Os05g17604.5LOC_Os05g17604.4LOC_Os05g17604.3
LOC_Os05g17604.2LOC_Os05g17604.1LOC_Os05g16430.1LOC_Os08g10320.3LOC_Os08g10320.2
LOC_Os08g10320.1LOC_Os08g10310.3LOC_Os08g10310.2LOC_Os08g10310.1LOC_Os04g52606.1
LOC_Os05g16930.1LOC_Os06g07130.1LOC_Os04g52590.1LOC_Os08g10250.1LOC_Os05g16824.4
LOC_Os05g16824.3LOC_Os05g16824.2LOC_Os05g16824.1LOC_Os05g16740.1
Panicum virgatumPavirv00010367mPavirv00021132mPavirv00063388mPavirv00039446mPavirv00006527m
Pavirv00041471mPavirv00039639mPavirv00031150mPavirv00014784mPavirv00036213m
Pavirv00070332mPavirv00032467mPavirv00022623mPavirv00048042m
Physcomitrella patensPp1s244_27V6.2
Phaseolus vulgarisPhvul.011G169300.1
Picea abiesMA_170647g0010MA_162469g0010MA_73800g0010MA_8849269g0010MA_18275g0010
MA_17053g0010MA_954053g0010MA_54077g0010MA_10436782g0010MA_404302g0010
MA_461914g0010
Populus trichocarpaPotri.006G255100.2Potri.018G026800.2Potri.018G026800.1Potri.006G255100.1Potri.001G082900.5
Potri.001G082900.4Potri.001G082900.3Potri.001G082900.2Potri.001G082900.1Potri.003G148000.3
Potri.003G148000.2Potri.003G148000.1Potri.007G067900.3Potri.007G067900.2Potri.007G067900.1
Prunus persicappa017326mppa017049mppa001211mppa001152mppa000802m
ppa015982mppa026535m
Ricinus communis29848.m00461730169.m00632829497.m00008929624.m000325
Setaria italicaSi013203mSi013191mSi013178mSi009240mSi012655m
Si009468mSi009463mSi009322mSi028769mSi028790m
Si009325mSi009466mSi009259mSi006097m
Selaginella moellendorffii438852
Sorghum bicolorSb07g005820.1Sb06g028570.1Sb06g028560.1Sb10g004730.1
Thellungiella halophilaThhalv10012006mThhalv10018064mThhalv10011215mThhalv10016280mThhalv10016175m
Thhalv10019658mThhalv10012222m
Vitis viniferaGSVIVT01037993001.434.602GSVIVT01037993001.434.602GSVIVT01035865001GSVIVT01013621001GSVIVT01029720001.503.674
GSVIVT01029720001.503.674GSVIVT01037982001GSVIVT01038011001GSVIVT01013612001GSVIVT01029718001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)