| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01013827001 |
| Family | CE8 |
| Protein Properties | Length: 370 Molecular Weight: 40472 Isoelectric Point: 6.6733 |
| Chromosome | Chromosome/Scaffold: 16 Start: 4915538 End: 4917247 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 71 | 355 | 0 |
| KVSKSGGGNFNTVMAAVNSVPAGNTRRVIIWIGGGEYEEKIKIDRDKPFITFYGSPEDMPKLSFDGTAAEFGTVDSATLIVESDYFMAVNIIVINSSPRP DGKRKGAQAVALRVSGDKAAFYNCRLIGFQDTLCDDRGRHFFHGCYVEGTVDYIFGSGKSLYLSTELHTKGDGGFSVITAQARNLESEDNGYSFVHCTLS GTGGNTFLGRAWMSRPKVVFSYTFMSPVVSPLGWSNNIHPERESLVFYGEYKCMGPGADTSKRSKFTKELDDDGATPFITLNYID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 370 Download |
| MATTMTSIAF FLLLLLLSLS AVLADNDNAQ IPSDKSQLAP WFRNSIQKYK LRRTTLDPAL 60 VEAEDSVKII KVSKSGGGNF NTVMAAVNSV PAGNTRRVII WIGGGEYEEK IKIDRDKPFI 120 TFYGSPEDMP KLSFDGTAAE FGTVDSATLI VESDYFMAVN IIVINSSPRP DGKRKGAQAV 180 ALRVSGDKAA FYNCRLIGFQ DTLCDDRGRH FFHGCYVEGT VDYIFGSGKS LYLSTELHTK 240 GDGGFSVITA QARNLESEDN GYSFVHCTLS GTGGNTFLGR AWMSRPKVVF SYTFMSPVVS 300 PLGWSNNIHP ERESLVFYGE YKCMGPGADT SKRSKFTKEL DDDGATPFIT LNYIDASTWL 360 LPPPGLALR* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 2.0e-83 | 68 | 360 | 303 | + pectinesterase | ||
| PLN02304 | PLN02304 | 5.0e-89 | 65 | 362 | 306 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 9.0e-90 | 69 | 360 | 292 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-99 | 70 | 362 | 301 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 1 | 366 | 366 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78808.1 | 0 | 34 | 369 | 8 | 344 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI38547.1 | 0 | 1 | 369 | 1 | 368 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38548.1 | 0 | 1 | 369 | 1 | 373 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277202.1 | 0 | 25 | 369 | 25 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277388.1 | 0 | 7 | 369 | 11 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 2e-32 | 72 | 360 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 1e-31 | 70 | 360 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 4e-19 | 69 | 240 | 7 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 4e-19 | 69 | 240 | 7 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 4e-19 | 69 | 240 | 7 | 193 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
