| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01013832001 |
| Family | CE8 |
| Protein Properties | Length: 369 Molecular Weight: 40458.9 Isoelectric Point: 6.9145 |
| Chromosome | Chromosome/Scaffold: 16 Start: 5021888 End: 5023523 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 70 | 354 | 0 |
| KVSKSGGGNFNTVMAAVNSVPAGNTQRVIIWIGGGVYEEKIKIDRNKPFITFYGSPEDMPKLSFDGTAAKFGTVDSATLIVESDYFMAVNIIVINSSPRP DGKRKGAQAVALRVSGDKAAFYNCRLIGFQDTLCDDRGRHFFHECYVEGTVDYIFGSGKSLYLSTELHTKGDGGFSVITAQARNLEWEDNGYSFVHCTLS GTGGNTFLGRAWMSRPRVVFSYTFMSSVVSPLGWSDNDQPERDSLVFYGEYKCMGPAADTSKRPKFSKELDDNGATPFITLNYID | |||
| Full Sequence |
|---|
| Protein Sequence Length: 369 Download |
| MAMTVISIAF FLLVPLSSSA VLADNDNAQI PSDKSQLAPW FRNSIQKYKL RRTTLDPALV 60 EAEDSVKIIK VSKSGGGNFN TVMAAVNSVP AGNTQRVIIW IGGGVYEEKI KIDRNKPFIT 120 FYGSPEDMPK LSFDGTAAKF GTVDSATLIV ESDYFMAVNI IVINSSPRPD GKRKGAQAVA 180 LRVSGDKAAF YNCRLIGFQD TLCDDRGRHF FHECYVEGTV DYIFGSGKSL YLSTELHTKG 240 DGGFSVITAQ ARNLEWEDNG YSFVHCTLSG TGGNTFLGRA WMSRPRVVFS YTFMSSVVSP 300 LGWSDNDQPE RDSLVFYGEY KCMGPAADTS KRPKFSKELD DNGATPFITL NYIDASTWLL 360 PPPGLVLR* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 8.0e-85 | 67 | 359 | 303 | + pectinesterase | ||
| PLN02432 | PLN02432 | 5.0e-90 | 68 | 359 | 292 | + putative pectinesterase | ||
| PLN02304 | PLN02304 | 1.0e-91 | 64 | 361 | 306 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-100 | 69 | 361 | 301 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 24 | 365 | 342 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78808.1 | 0 | 33 | 368 | 8 | 344 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI38547.1 | 0 | 1 | 368 | 1 | 368 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38548.1 | 0 | 8 | 368 | 17 | 373 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277202.1 | 0 | 24 | 368 | 25 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277388.1 | 0 | 8 | 368 | 13 | 369 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 7e-35 | 71 | 359 | 7 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 6e-33 | 69 | 359 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 6e-22 | 68 | 239 | 7 | 193 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 6e-22 | 68 | 239 | 7 | 193 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 6e-22 | 68 | 239 | 7 | 193 | A Chain A, Pectin Methylesterase From Carrot |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
