| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01014120001 |
| Family | CBM57 |
| Protein Properties | Length: 383 Molecular Weight: 42813.8 Isoelectric Point: 9.0823 |
| Chromosome | Chromosome/Scaffold: 19 Start: 549308 End: 557539 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM57 | 82 | 247 | 9.4e-32 |
| MRINCGGKEVIVDGNTKYEDDTDSGGPSKFYQSRTNWAFSSTGHFMDNDRPTDSFIGTNMSRFTMENSGLYTTARLSALSLTFYGFCLENGNYTVKLHFA EITFTDDKTYSSLGRRLFDVYVQHELVLKDFNIEDEAGGVGKEIIKFFTAVVTNNALEIRFYWAGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 383 Download |
| MTKLKTLDLN FNKLTGEIPS SFVGVSKADY MNFTRNMLTR AMPDWMLKRG DNYDLSFNNF 60 TNISFQFYFA VSFNYPKKFY SMRINCGGKE VIVDGNTKYE DDTDSGGPSK FYQSRTNWAF 120 SSTGHFMDND RPTDSFIGTN MSRFTMENSG LYTTARLSAL SLTFYGFCLE NGNYTVKLHF 180 AEITFTDDKT YSSLGRRLFD VYVQHELVLK DFNIEDEAGG VGKEIIKFFT AVVTNNALEI 240 RFYWAGKGTT GIPVRGIYGP LISAVSVDPD FLPPSRNGSS SISVSIVVGI VAGVILLIFL 300 VISILWWRGC LRRKYTLEQD LKGLDQQTDL FTLRQIKAAT NNFDANNKIG EVGFGSVYKG 360 LLSDGTIIAV KQLSSKAKQG KP* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 0.0003 | 3 | 61 | 61 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN03150 | PLN03150 | 2.0e-5 | 149 | 252 | 104 | + hypothetical protein; Provisional | ||
| pfam11721 | Malectin | 1.0e-62 | 80 | 265 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI20121.1 | 0 | 1 | 380 | 298 | 698 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20124.1 | 0 | 1 | 380 | 327 | 727 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20127.1 | 0 | 1 | 380 | 298 | 702 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI20129.1 | 0 | 1 | 382 | 1 | 382 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283596.1 | 0 | 1 | 380 | 327 | 727 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3tl8_H | 0.000000006 | 327 | 380 | 24 | 77 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_G | 0.000000006 | 327 | 380 | 24 | 77 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_D | 0.000000006 | 327 | 380 | 24 | 77 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3tl8_A | 0.000000006 | 327 | 380 | 24 | 77 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
| PDB | 3ulz_A | 0.000000007 | 327 | 380 | 16 | 69 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
