| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01014681001 |
| Family | GH14 |
| Protein Properties | Length: 523 Molecular Weight: 59727.5 Isoelectric Point: 9.0605 |
| Chromosome | Chromosome/Scaffold: 19 Start: 8566312 End: 8585299 |
| Description | beta-amylase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 85 | 511 | 0 |
| FVMMPVDSFGIDTSGAPRIRRIKALTISLKALKLAGVHGIAVEVWWGIVERFSPFVYNWSLYEELFKLISESGLKLHVALSFHSNMHSSSRVKGGVSLPL WIVEIGDLNKDIYYRDQNGFSNDDYLTLGVDELPLFCGRTALQCYEDFMFSFINKFESFIGSVIEEISVGLGPSGELRYPAHPFGDGRWRFPGIGEFQCY DKYMMRDLKIAACQEGKPQWGDKGPQNAGYYNSLPSGVPFFEEGQESFLSDYGRFFLEWYSGRLIRHADAILTKAANMLKKYQESKKSSVLLVAKIGGIY WWYHTLSHPAELTAGYYNTALRDGYDPVASMLSRHGAALHISCLEMMDNETPPTYLCSPERLLQQIWTVSKKRIVHLTGRNTNERFDKAGLWQIHANCYH PQAEAVRSFTYFRMNEKIFRAENWNNF | |||
| Full Sequence |
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| Protein Sequence Length: 523 Download |
| MAENGGVACK CTERGIYGFR GARFDKRSRI RKNLRNVSMI PLFKHNGLFI WRSIAANNCI 60 FSMDAREKSR STTLETPGHK RVPIFVMMPV DSFGIDTSGA PRIRRIKALT ISLKALKLAG 120 VHGIAVEVWW GIVERFSPFV YNWSLYEELF KLISESGLKL HVALSFHSNM HSSSRVKGGV 180 SLPLWIVEIG DLNKDIYYRD QNGFSNDDYL TLGVDELPLF CGRTALQCYE DFMFSFINKF 240 ESFIGSVIEE ISVGLGPSGE LRYPAHPFGD GRWRFPGIGE FQCYDKYMMR DLKIAACQEG 300 KPQWGDKGPQ NAGYYNSLPS GVPFFEEGQE SFLSDYGRFF LEWYSGRLIR HADAILTKAA 360 NMLKKYQESK KSSVLLVAKI GGIYWWYHTL SHPAELTAGY YNTALRDGYD PVASMLSRHG 420 AALHISCLEM MDNETPPTYL CSPERLLQQI WTVSKKRIVH LTGRNTNERF DKAGLWQIHA 480 NCYHPQAEAV RSFTYFRMNE KIFRAENWNN FVPFVRKMST DM* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02905 | PLN02905 | 4.0e-103 | 78 | 518 | 450 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-135 | 82 | 521 | 450 | + beta-amylase | ||
| PLN00197 | PLN00197 | 2.0e-146 | 52 | 518 | 477 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 7.0e-151 | 60 | 519 | 469 | + beta-amylase | ||
| PLN02161 | PLN02161 | 0 | 1 | 522 | 534 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK76508.1 | 0 | 39 | 522 | 1 | 484 | putative beta-amylase [Arabidopsis thaliana] |
| GenBank | AAK84008.1 | 0 | 3 | 519 | 16 | 508 | AF393847_1 beta-amylase PCT-BMYI [Solanum tuberosum] |
| DDBJ | BAH20280.1 | 0 | 29 | 522 | 5 | 498 | AT5G55700 [Arabidopsis thaliana] |
| RefSeq | NP_568829.2 | 0 | 1 | 522 | 1 | 531 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_002265698.1 | 0 | 1 | 522 | 1 | 522 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 82 | 522 | 6 | 439 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1wdr_A | 0 | 82 | 521 | 12 | 444 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
| PDB | 1uko_D | 0 | 82 | 521 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 82 | 521 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_B | 0 | 82 | 521 | 12 | 444 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT743582 | 283 | 236 | 518 | 0 |
| EC924777 | 168 | 259 | 426 | 0 |
| EC924777 | 103 | 422 | 523 | 0 |
| DY945573 | 257 | 251 | 507 | 0 |
| GO368294 | 292 | 117 | 408 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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