| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01014995001 |
| Family | CBM43 |
| Protein Properties | Length: 488 Molecular Weight: 53298.9 Isoelectric Point: 6.7672 |
| Chromosome | Chromosome/Scaffold: 11 Start: 264334 End: 265915 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 363 | 444 | 7.8e-25 |
| WCVMAPEANIADPNLTESINYACTYADCTSLGYGSSCSRLDTRSNASYAFNMYYQTMNHQKDSCKFSNLSVITSINPSQGTC | |||
| GH17 | 26 | 343 | 0 |
| ACNWGTISTHPLPPDITVKLLKDNGFNKVKLFEAQPGVLRALGNSGIQVMLGIPNDFLAPLASSVGFAVKWVSQNVSTYVSKYGVDIRYVAVGNEPFLKT YKDSFLQTTFPALKNIQAALIKAGLGEKVRVTVPLNADVYQTDSGLPSGGDFRSDIHALMISIIKFLSDNDGPLTINIYPFLSLYADPHFPVDYAFFSGN STPIVDGSISYTNVFEANYDTLIWALEKNGFPSIPVIIGEVGWPTDGDSNANLQYAKKFNQGLVNRILRGQGTPKRSDAPDIYLFGLLDEDAKSIQPGNF ERHWGIFYFDGTVKYSLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 488 Download |
| MALSYLVWML LLSLVGGLGV EGVGLACNWG TISTHPLPPD ITVKLLKDNG FNKVKLFEAQ 60 PGVLRALGNS GIQVMLGIPN DFLAPLASSV GFAVKWVSQN VSTYVSKYGV DIRYVAVGNE 120 PFLKTYKDSF LQTTFPALKN IQAALIKAGL GEKVRVTVPL NADVYQTDSG LPSGGDFRSD 180 IHALMISIIK FLSDNDGPLT INIYPFLSLY ADPHFPVDYA FFSGNSTPIV DGSISYTNVF 240 EANYDTLIWA LEKNGFPSIP VIIGEVGWPT DGDSNANLQY AKKFNQGLVN RILRGQGTPK 300 RSDAPDIYLF GLLDEDAKSI QPGNFERHWG IFYFDGTVKY SLDLGKNKTL VPAKGVRYLE 360 RRWCVMAPEA NIADPNLTES INYACTYADC TSLGYGSSCS RLDTRSNASY AFNMYYQTMN 420 HQKDSCKFSN LSVITSINPS QGTCRFEVMI DVGKHDTRAT SSSAGGLQNL AIRVIFVLIL 480 IIYGGVC* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-6 | 193 | 335 | 147 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 1.0e-13 | 362 | 431 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-29 | 363 | 446 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 8.0e-70 | 28 | 343 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 21 | 487 | 21 | 487 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277217.1 | 0 | 9 | 487 | 1 | 479 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 24 | 448 | 1 | 425 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002467735.1 | 0 | 24 | 481 | 29 | 494 | hypothetical protein SORBIDRAFT_01g033200 [Sorghum bicolor] |
| RefSeq | XP_002516181.1 | 0 | 1 | 486 | 16 | 502 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 32 | 333 | 7 | 295 | A Chain A, Bacillus Subtilis Pectate Lyase |
| PDB | 1aq0_B | 0 | 32 | 333 | 7 | 295 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 32 | 333 | 7 | 295 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 1.4013e-45 | 29 | 344 | 5 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 4.2039e-45 | 37 | 344 | 13 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
