| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01015000001 |
| Family | CE8 |
| Protein Properties | Length: 389 Molecular Weight: 42716.3 Isoelectric Point: 4.3273 |
| Chromosome | Chromosome/Scaffold: 11 Start: 312430 End: 317760 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 109 | 303 | 0 |
| LTVAADGTGNFTTVTDAINFAPNNSNDRIIIYVREGVYEENVDIPSHKTNIVFLGDGSDVTFITGSRSVVDGWTTFRSATVAVSGEGFLARDITFENRAG PEKHQAVALRINADLAAVYKCTILGYQDTLYVHSFRQFYRECDIFGTIDFIFGNAAVVFQACNIVARMPMAGQFTVVTAQSRDTSDEDTGISIQN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 389 Download |
| MKGRANLSGV LLEIRDSQKL KDARAFLSAS LTNKVTCLEG LDSAAGPSKP TLVNSIVAAY 60 KHVSNCLSVL SKSTPQKGPI NRRLMGAPAW ASRRILQSSG DEYDPSEVLT VAADGTGNFT 120 TVTDAINFAP NNSNDRIIIY VREGVYEENV DIPSHKTNIV FLGDGSDVTF ITGSRSVVDG 180 WTTFRSATVA VSGEGFLARD ITFENRAGPE KHQAVALRIN ADLAAVYKCT ILGYQDTLYV 240 HSFRQFYREC DIFGTIDFIF GNAAVVFQAC NIVARMPMAG QFTVVTAQSR DTSDEDTGIS 300 IQNFYLESYI DDFIDPSGWT EWNGNEGLDT LYYGEYDNNG PGSGTENRVT WQGYHVMEDN 360 DAYNFTVSEF ITGDEWLDST YFPYDDGI* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 3.0e-137 | 22 | 388 | 411 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-138 | 2 | 388 | 422 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 4.0e-145 | 19 | 388 | 432 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 7.0e-164 | 110 | 374 | 296 | + Pectinesterase. | ||
| PLN02416 | PLN02416 | 0 | 16 | 388 | 408 | + probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| DDBJ | BAH56489.1 | 0 | 16 | 388 | 138 | 543 | pectin methylesterase 1 [Prunus persica] |
| EMBL | CBI27742.1 | 0 | 1 | 388 | 1 | 388 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273535.1 | 0 | 16 | 388 | 130 | 529 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326320.1 | 0 | 16 | 388 | 131 | 539 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516192.1 | 0 | 12 | 388 | 133 | 543 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 109 | 388 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 111 | 388 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-17 | 119 | 275 | 18 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-17 | 119 | 275 | 18 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-17 | 119 | 275 | 18 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FG610488 | 388 | 31 | 379 | 0 |
| EX682621 | 225 | 82 | 303 | 0 |
| JG622622 | 247 | 16 | 257 | 0 |
| HO778758 | 416 | 17 | 388 | 0 |
| CN946604 | 211 | 68 | 275 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |