| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01015019001 |
| Family | CE8 |
| Protein Properties | Length: 538 Molecular Weight: 59467.7 Isoelectric Point: 6.0982 |
| Chromosome | Chromosome/Scaffold: 11 Start: 494466 End: 497941 |
| Description | pectin methylesterase 2 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 267 | 464 | 0 |
| DIVVASDGSGHFSTIGEAISTAPNKSSNRFVIKIKAGVYKENVEIPREKVNIMLVGEGMNSTVITGSKSFVDGFSTFTSATLTVVGDKFLARDLTIINTA GPEKHQAVAVRVTSNSAFYRCNFSSYQDTLYAHSLRQFYRECTIQGTIDFIFGNAAAVFQNCLILVRKPSPGQKNMITAQGRGDPNQNTGISLQNCTI | |||
| Full Sequence |
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| Protein Sequence Length: 538 Download |
| MPRQPFLEAN GDAFIWTRLM TIVLGVFLTL PTLILFASFL NEEGDQELVR SSTQPQPLHP 60 LIKNACTNTL YPSLCFTTLS SAPATSKNTT TLHHILEIAV NATVSSVMDS GSDIKALFTY 120 QDLNSQEKNA LNDCMEMTDQ TLYELGQAID DLHAFPPSIG DPHRLYTNLK TLLSAAMTNE 180 NTCIDGFTDL EEADSESQKG LKGHLQSVLT PISGMISNCL AIIKYMETIA LRDRKIMNTT 240 MPRDEFPAWM TAIDRKLIEM VPKIRPDIVV ASDGSGHFST IGEAISTAPN KSSNRFVIKI 300 KAGVYKENVE IPREKVNIML VGEGMNSTVI TGSKSFVDGF STFTSATLTV VGDKFLARDL 360 TIINTAGPEK HQAVAVRVTS NSAFYRCNFS SYQDTLYAHS LRQFYRECTI QGTIDFIFGN 420 AAAVFQNCLI LVRKPSPGQK NMITAQGRGD PNQNTGISLQ NCTIGWYKWN KYSTLDTVEY 480 IEYLNFGPGS DTRHRVTWGG YRKNCSEDIA KQFTAEVFLH GASEWLESIG FPLVHGS* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 2.0e-132 | 50 | 532 | 529 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 1.0e-132 | 18 | 532 | 571 | + pectinesterase | ||
| PLN02506 | PLN02506 | 9.0e-134 | 33 | 536 | 538 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02313 | PLN02313 | 4.0e-140 | 59 | 533 | 536 | + Pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-145 | 267 | 521 | 297 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAB95025.1 | 0 | 59 | 536 | 59 | 578 | pectin methylesterase [Nicotiana tabacum] |
| EMBL | CBI27756.1 | 0 | 1 | 537 | 1 | 537 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265171.1 | 0 | 59 | 536 | 94 | 610 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277473.1 | 0 | 41 | 537 | 44 | 582 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002304257.1 | 0 | 52 | 536 | 53 | 578 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 264 | 536 | 5 | 318 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 264 | 536 | 1 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-19 | 271 | 433 | 12 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-19 | 271 | 433 | 12 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-19 | 271 | 433 | 12 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 13 | 35 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO778758 | 486 | 100 | 536 | 0 |
| EE639960 | 249 | 303 | 509 | 0 |
| DY281245 | 303 | 169 | 465 | 0 |
| HO852920 | 413 | 168 | 536 | 0 |
| FC877835 | 298 | 169 | 460 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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