| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01015282001 |
| Family | CBM43 |
| Protein Properties | Length: 495 Molecular Weight: 53814.9 Isoelectric Point: 5.6461 |
| Chromosome | Chromosome/Scaffold: 11 Start: 2371104 End: 2375298 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 365 | 447 | 5.8e-31 |
| WCIASSTASEMDLQNALDWACGPGNVDCSAIQPSQPCFEPDNVVSHASFAFNSYYQQNGATDIACSFGGSGIKVNKNPSYDNC | |||
| GH17 | 26 | 343 | 0 |
| IGVCYGRNADDLPTPDKVAQLVQLHKIKYLRIYDSNIQVLKAFANTGVELMIGISNSDLLPFSQFQSNADTWLRNSILPYYPATRITHITVGAEVTESPN NASSMVVPAMKNVLTALRKAGLHKKIKVSSTHSLGILSRSFPPSAGAFNSSHAFFLKPMLEFLAENQSPFMVDIYPYYAYRDSPNNVSLDYALFESSSEV IDPNTGLLYTNMFDAQIDALYFALMALNFRTIKIMVTETGWPSKGSPKETAATPDNAQTYNTNLIRHVINDTGTPAKPGEDLDVYIFSLFNENRKSGLES ERNWGLFYPDQTSVYNLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 495 Download |
| MARGFRLIFA TSLLLTLLGL CRGSTIGVCY GRNADDLPTP DKVAQLVQLH KIKYLRIYDS 60 NIQVLKAFAN TGVELMIGIS NSDLLPFSQF QSNADTWLRN SILPYYPATR ITHITVGAEV 120 TESPNNASSM VVPAMKNVLT ALRKAGLHKK IKVSSTHSLG ILSRSFPPSA GAFNSSHAFF 180 LKPMLEFLAE NQSPFMVDIY PYYAYRDSPN NVSLDYALFE SSSEVIDPNT GLLYTNMFDA 240 QIDALYFALM ALNFRTIKIM VTETGWPSKG SPKETAATPD NAQTYNTNLI RHVINDTGTP 300 AKPGEDLDVY IFSLFNENRK SGLESERNWG LFYPDQTSVY NLDMTGKGAV TMTTETNVTS 360 SNGTWCIASS TASEMDLQNA LDWACGPGNV DCSAIQPSQP CFEPDNVVSH ASFAFNSYYQ 420 QNGATDIACS FGGSGIKVNK NPSYDNCLYM TTGSNKTAAS NATTALASTT TSSAANALFA 480 WTLSCLLMAL LSFL* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-7 | 24 | 335 | 324 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-22 | 364 | 436 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-39 | 364 | 449 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 1.0e-111 | 26 | 343 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABD91576.1 | 0 | 1 | 465 | 1 | 470 | beta-1,3-glucanase [Medicago sativa] |
| GenBank | ABD91577.1 | 0 | 1 | 465 | 1 | 470 | beta-1,3-glucanase [Medicago sativa] |
| RefSeq | XP_002283473.1 | 0 | 1 | 494 | 1 | 494 | PREDICTED: similar to beta-1,3-glucanase [Vitis vinifera] |
| RefSeq | XP_002330523.1 | 0 | 21 | 453 | 22 | 455 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514201.1 | 0 | 1 | 484 | 1 | 487 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 0 | 26 | 342 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 1ghs_B | 0 | 26 | 344 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 1ghs_A | 0 | 26 | 344 | 1 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_D | 0 | 26 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
| PDB | 3f55_C | 0 | 26 | 345 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
