| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01015563001 |
| Family | GH17 |
| Protein Properties | Length: 343 Molecular Weight: 37803.3 Isoelectric Point: 9.5972 |
| Chromosome | Chromosome/Scaffold: 11 Start: 4949774 End: 4954868 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH17 | 185 | 299 | 1.3e-40 |
| AKLHYDNMLDAQIDAAYAALENSGFKKMEVIITETGWASRGDENEAAATSTNARTYNYNLRKRLAKKKGTPLRPKNVVKAYIFAVFNENLKPGPTSERNF GLFKADGSISYDIGF | |||
| GH17 | 34 | 185 | 0 |
| GINYGRIADNIPSPDEVVTLLRALKIKNVRIYDADHSVLEAFSGTGLEIVVGVPNGNLKDMNASEDHALSWVKENVQSFLPDTHIRGIAVGNEVLGGDQE LWGVLLGAVKNVHKALEKFHLTDLIQVSTAHSQAVLSNSYPPSSCIFNQNIA | |||
| Full Sequence |
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| Protein Sequence Length: 343 Download |
| MKSWRFFYRF LRVFFIVFAM NGSLTVQAFT GTYGINYGRI ADNIPSPDEV VTLLRALKIK 60 NVRIYDADHS VLEAFSGTGL EIVVGVPNGN LKDMNASEDH ALSWVKENVQ SFLPDTHIRG 120 IAVGNEVLGG DQELWGVLLG AVKNVHKALE KFHLTDLIQV STAHSQAVLS NSYPPSSCIF 180 NQNIAKLHYD NMLDAQIDAA YAALENSGFK KMEVIITETG WASRGDENEA AATSTNARTY 240 NYNLRKRLAK KKGTPLRPKN VVKAYIFAVF NENLKPGPTS ERNFGLFKAD GSISYDIGFK 300 GLKSSATSSI LSLKKIRAQD WSASYSLVFT ACAAVLLLFL RL* 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 3.0e-7 | 31 | 290 | 286 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-75 | 34 | 299 | 316 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY25165.1 | 0 | 27 | 321 | 27 | 378 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
| EMBL | CBI28222.1 | 0 | 1 | 342 | 1 | 342 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002282272.1 | 0 | 1 | 342 | 1 | 394 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
| RefSeq | XP_002308978.1 | 0 | 25 | 306 | 1 | 335 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002325214.1 | 0 | 24 | 341 | 8 | 377 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ur8_B | 0 | 34 | 299 | 4 | 314 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3ur8_A | 0 | 34 | 299 | 4 | 314 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 3ur7_B | 0 | 34 | 299 | 4 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 0 | 34 | 299 | 4 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 4gzj_A | 0 | 34 | 299 | 4 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
| Start | End | |||
| 13 | 35 | |||
| 321 | 340 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CF204597 | 184 | 3 | 186 | 0 |
| EL455956 | 297 | 28 | 271 | 0 |
| ES912714 | 275 | 28 | 249 | 0 |
| DT559271 | 303 | 90 | 339 | 0 |
| CO114700 | 275 | 14 | 236 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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