| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01015803001 |
| Family | AA7 |
| Protein Properties | Length: 164 Molecular Weight: 17951 Isoelectric Point: 10.0141 |
| Chromosome | Chromosome/Scaffold: 3 Start: 17636596 End: 17637951 |
| Description | FAD-binding Berberine family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 13 | 137 | 0 |
| GHLITSGVCPTLGVGGHFSGGGYGNMLRKFGLSVDHIVDAQIVNVNGSILDRKSMGEDLFWAIRGGGGASFGVILSYKIKLVRVPEIVTVFRVEKTLAQN ATDIAYQWQHITDKIDNDLFIRLLL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 164 Download |
| MHTKSRSGKR YIGHLITSGV CPTLGVGGHF SGGGYGNMLR KFGLSVDHIV DAQIVNVNGS 60 ILDRKSMGED LFWAIRGGGG ASFGVILSYK IKLVRVPEIV TVFRVEKTLA QNATDIAYQW 120 QHITDKIDND LFIRLLLQPI TIKLCALGHW LTREIIFGSL LSI* 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0277 | GlcD | 5.0e-6 | 40 | 102 | 69 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI34086.1 | 0 | 14 | 143 | 166 | 295 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI34093.1 | 0 | 1 | 163 | 1 | 163 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002268749.1 | 0 | 12 | 143 | 36 | 167 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002270139.1 | 0 | 14 | 143 | 166 | 295 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276003.1 | 0 | 14 | 143 | 169 | 298 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3tsj_B | 2e-32 | 18 | 138 | 147 | 267 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsj_A | 2e-32 | 18 | 138 | 147 | 267 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 3tsh_A | 2e-32 | 18 | 138 | 147 | 267 | A Chain A, Crystal Structure Of Phl P 4, A Grass Pollen Allergen With Glucose Dehydrogenase Activity |
| PDB | 4dns_B | 1e-31 | 18 | 136 | 149 | 267 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| PDB | 4dns_A | 1e-31 | 18 | 136 | 149 | 267 | A Chain A, Crystal Structure Of Bermuda Grass Isoallergen Bg60 Provides Insight Into The Various Cross-Allergenicity Of The Pollen Group 4 Allergens |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| berberine biosynthesis | RETICULINE-OXIDASE-RXN | EC-1.21.3.3 | reticuline oxidase |
| dehydroscoulerine biosynthesis | RETICULINE-OXIDASE-RXN | EC-1.21.3.3 | reticuline oxidase |
| sanguinarine and macarpine biosynthesis | RETICULINE-OXIDASE-RXN | EC-1.21.3.3 | reticuline oxidase |
