| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01015894001 |
| Family | CBM43 |
| Protein Properties | Length: 254 Molecular Weight: 27212.1 Isoelectric Point: 4.7939 |
| Chromosome | Chromosome/Scaffold: 3 Start: 19009143 End: 19010994 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 167 | 248 | 7.5e-34 |
| WCVAKPTVPDPIIQEAMDYACGKGADCEAIKPDGLCFQPNTLFAHASYAFNSYWQRTKVAGGTCDFGGTAMLVTVNPSFDEC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 254 Download |
| MFNIVVFIFI SVTTLIISTP CDARSSAQML EVEGEEFGES SVTGGRKMQQ VAVNLENTDS 60 YISSPFSLPP FDSLSPLPSP ETAPPFCVCP PFSPQPPSIP TTPPIFQGPP THSPVPNPPE 120 YELPSPPKHA PSSPKRAPSP PVFKPPVVLP PPSTPPPLHK APQYAVWCVA KPTVPDPIIQ 180 EAMDYACGKG ADCEAIKPDG LCFQPNTLFA HASYAFNSYW QRTKVAGGTC DFGGTAMLVT 240 VNPSFDECHF VYN* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 3.0e-23 | 167 | 237 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-39 | 167 | 250 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN78496.1 | 0 | 1 | 253 | 10 | 262 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI34142.1 | 0 | 1 | 253 | 1 | 253 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264622.1 | 0 | 1 | 248 | 10 | 258 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516415.1 | 0 | 56 | 253 | 4 | 263 | conserved hypothetical protein [Ricinus communis] |
| RefSeq | XP_002520569.1 | 0 | 76 | 253 | 69 | 249 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 4e-21 | 153 | 250 | 1 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
