| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01016553001 |
| Family | CBM43 |
| Protein Properties | Length: 407 Molecular Weight: 43863.2 Isoelectric Point: 8.3362 |
| Chromosome | Chromosome/Scaffold: 13 Start: 2859227 End: 2862204 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 321 | 403 | 1.8e-34 |
| WCVPKPDATDEALQSNINYVCSTGVDCKPIQPGGACYDPNTIRSHASYAMNAYYQTSGRHDFNCDFANTGVLATSDPSHGPCQ | |||
| GH17 | 199 | 300 | 2e-35 |
| MMDAVYSAMKVLGYGDVEIMVAETGWPSLGDPNQVGVNLENAASYNGNLLKHISSGKGTPLMPNRRFQTYLFSLFNENLKPGSTAERNFGLFRPDFTPVY DI | |||
| GH17 | 28 | 202 | 0 |
| IGVNYGTLADNLPPPAQVANFLKTRTTIDQIKIFDSNPDILRAFASTGIGVTITVGNGDIPAITKLPAARDWVATHILPFYPSTKINYVAVGNEIMATAD KNLIGHLVPAMKALHNALVLAKITDIKVSTPHSLGILSMSEPPSVGRFRRGYDKVIFAPMLEFHRQTKSPFMMDA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 407 Download |
| MALLALQSLR FVIFGVSALL FSATAYSIGV NYGTLADNLP PPAQVANFLK TRTTIDQIKI 60 FDSNPDILRA FASTGIGVTI TVGNGDIPAI TKLPAARDWV ATHILPFYPS TKINYVAVGN 120 EIMATADKNL IGHLVPAMKA LHNALVLAKI TDIKVSTPHS LGILSMSEPP SVGRFRRGYD 180 KVIFAPMLEF HRQTKSPFMM DAVYSAMKVL GYGDVEIMVA ETGWPSLGDP NQVGVNLENA 240 ASYNGNLLKH ISSGKGTPLM PNRRFQTYLF SLFNENLKPG STAERNFGLF RPDFTPVYDI 300 GILKQSAGGA PTPTVPSGKK WCVPKPDATD EALQSNINYV CSTGVDCKPI QPGGACYDPN 360 TIRSHASYAM NAYYQTSGRH DFNCDFANTG VLATSDPSHG PCQYIS* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 7.0e-26 | 320 | 391 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-43 | 320 | 404 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 5.0e-69 | 28 | 300 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN83700.1 | 0 | 123 | 406 | 1 | 325 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283647.1 | 0 | 1 | 406 | 1 | 447 | PREDICTED: hypothetical protein isoform 1 [Vitis vinifera] |
| RefSeq | XP_002283660.1 | 0 | 1 | 406 | 1 | 406 | PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] |
| RefSeq | XP_002298356.1 | 0 | 22 | 398 | 21 | 447 | glycoside hydrolase [Populus trichocarpa] |
| RefSeq | XP_002532848.1 | 0 | 26 | 404 | 23 | 444 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2cyg_A | 2.8026e-45 | 28 | 300 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_B | 1.00053e-42 | 28 | 302 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur8_A | 1.00053e-42 | 28 | 302 | 3 | 314 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3ur7_B | 1.00053e-42 | 28 | 302 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
| PDB | 3ur7_A | 1.00053e-42 | 28 | 302 | 3 | 314 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
