| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01016667001 |
| Family | CE8 |
| Protein Properties | Length: 671 Molecular Weight: 73753.5 Isoelectric Point: 9.1855 |
| Chromosome | Chromosome/Scaffold: 9 Start: 241390 End: 248247 |
| Description | pectin methylesterase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 1 | 244 | 0 |
| MFLGDGRSNTIITGSKNVVDGSTTFNSATVAVVGEKFIARDITFQNTAGPSKHQAVALRVGSDLSAFYKCDMLAYQDTLYVHSNRQFYINCLVAGTVDFI FGNAAAVFQDCDIHARRPNSGQKNMLTAQGRTDPNQNTGIVIQKCRIGATSDLQAVISSFKTYLGRPWKEYSRTVVMQTSITNVIDPAGWHEWSGSFALS TLYYGEYQNTGAGAGTSKRVTWKGFKVITSASEAQGFTPGTFIA | |||
| CE8 | 363 | 655 | 0 |
| DVTVAKDGTGDYVTIKEAVAMVPKKSEKRFVIYVKEGNYSENIILDKSKWNVMIYGDGKDKSIVSGNLNFIDGTPTFATATFAAVGKGFIAKYMRFENTA GAAKHQAVAFRSGSDMSVFYQCSFDAFQDTLYAHSNRQFYRECDITGTIDFIFGNAAVVFQACKIQPRQPMSNQFNTITAQGKKDPNQNTGISIQKCSIS ALNTLTAPTYLGRPWKAYSTTIVMQSNIGSFLNPKGWTEWVTGVDPPSTIFYAEFQNTGPGATLDQRVKWAGFMTNITEDEAAKFTVGTFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 671 Download |
| MFLGDGRSNT IITGSKNVVD GSTTFNSATV AVVGEKFIAR DITFQNTAGP SKHQAVALRV 60 GSDLSAFYKC DMLAYQDTLY VHSNRQFYIN CLVAGTVDFI FGNAAAVFQD CDIHARRPNS 120 GQKNMLTAQG RTDPNQNTGI VIQKCRIGAT SDLQAVISSF KTYLGRPWKE YSRTVVMQTS 180 ITNVIDPAGW HEWSGSFALS TLYYGEYQNT GAGAGTSKRV TWKGFKVITS ASEAQGFTPG 240 TFIAGSSWLG STGFPYSLGL EHQKGIWTYG TFVRTTTLLD AYMDSIKSFK GYGKVDELEE 300 RAFKRKTRKR LIILIISSVV LVAVIIDIQV HRKLLSFSNS DQFPDWVGAG ERRLLQETKP 360 TPDVTVAKDG TGDYVTIKEA VAMVPKKSEK RFVIYVKEGN YSENIILDKS KWNVMIYGDG 420 KDKSIVSGNL NFIDGTPTFA TATFAAVGKG FIAKYMRFEN TAGAAKHQAV AFRSGSDMSV 480 FYQCSFDAFQ DTLYAHSNRQ FYRECDITGT IDFIFGNAAV VFQACKIQPR QPMSNQFNTI 540 TAQGKKDPNQ NTGISIQKCS ISALNTLTAP TYLGRPWKAY STTIVMQSNI GSFLNPKGWT 600 EWVTGVDPPS TIFYAEFQNT GPGATLDQRV KWAGFMTNIT EDEAAKFTVG TFIQGASWLS 660 ESSVTFDASL * 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 9.0e-10 | 283 | 310 | 28 | + pectinesterase | ||
| PLN02314 | PLN02314 | 9.0e-110 | 1 | 260 | 261 | + pectinesterase | ||
| pfam01095 | Pectinesterase | 1.0e-169 | 1 | 246 | 246 | + Pectinesterase. | ||
| pfam01095 | Pectinesterase | 8.0e-170 | 363 | 655 | 298 | + Pectinesterase. | ||
| PLN02314 | PLN02314 | 0 | 329 | 670 | 344 | + pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN74214.1 | 0 | 383 | 670 | 1 | 288 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI35795.1 | 0 | 1 | 670 | 1 | 670 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265217.1 | 0 | 1 | 260 | 323 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002265217.1 | 0.000001 | 283 | 309 | 1 | 27 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002265217.1 | 0 | 313 | 670 | 221 | 578 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 1 | 260 | 60 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1gq8_A | 0 | 362 | 670 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 1 | 260 | 56 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1xg2_A | 0 | 363 | 666 | 4 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 8e-20 | 20 | 218 | 79 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
