| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01016849001 |
| Family | GH35 |
| Protein Properties | Length: 842 Molecular Weight: 93165 Isoelectric Point: 8.1017 |
| Chromosome | Chromosome/Scaffold: 9 Start: 1940557 End: 1947535 |
| Description | beta galactosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 38 | 340 | 0 |
| VINGQRRILISGSIHYPRSSPEMWPDLIQKAKEGGLDVIQTYVFWNGHEPSQGKYYFEGRYDLVRFIKLVKQAGLYVNLRIGPYVCAEWNFGGFPVWLKY VQGINFRTNNEPFKWHMQRFTKKIVDMMKSEGLFESQGGPIILSQIENEYGPMEYEIGAPGRAYTEWAAKMAVGLGTGVPWVMCKQDDAPDPIINTCNGF YCDYFSPNKAYKPKMWTEAWTGWFTEFGGAVPHRPAEDLAFSVARFIQKGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEFGLLRQPKWGHLKD LHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 842 Download |
| MWEGLRAKTV SFLVVVVVLS SLVCWVTASV SYDRRAIVIN GQRRILISGS IHYPRSSPEM 60 WPDLIQKAKE GGLDVIQTYV FWNGHEPSQG KYYFEGRYDL VRFIKLVKQA GLYVNLRIGP 120 YVCAEWNFGG FPVWLKYVQG INFRTNNEPF KWHMQRFTKK IVDMMKSEGL FESQGGPIIL 180 SQIENEYGPM EYEIGAPGRA YTEWAAKMAV GLGTGVPWVM CKQDDAPDPI INTCNGFYCD 240 YFSPNKAYKP KMWTEAWTGW FTEFGGAVPH RPAEDLAFSV ARFIQKGGSF INYYMYHGGT 300 NFGRTAGGPF IATSYDYDAP LDEFGLLRQP KWGHLKDLHR AIKLCEPALI SGDPTVTSLG 360 NYEEAHVFHS KSGACAAFLA NYNPRSYAKV SFRNMHYNLP PWSISILPDC KNTVYNTARL 420 GAQSATMKMT PVSGRFGWQS YNEETASYDD SSFAAVGLLE QINTTRDVSD YLWYSTDVKI 480 GYNEGFLKSG RYPVLTVLSA GHALHVFING RLSGTAYGSL ENPKLTFSQG VKLRAGVNTI 540 ALLSIAVGLP NVGPHFETWN AGVLGPVSLN GLNEGRRDLS WQKWSYKVGL KGEALSLHSL 600 SGSSSVEWVE GSLMARGQPL TWYKTTFNAP GGNTPLALDM GSMGKGQIWI NGQNVGRYWP 660 AYKATGGCGD CNYAGTYSEK KCLSNCGEPS QRWYHVPHSW LSPTGNLLVV FEESGGNPAG 720 ISLVEREIES VCADIYEWQP TLMNYEMQAS GKVNKPLRPK AHLWCAPGQK ISSIKFASFG 780 TPEGVCGSYR EGSCHAHKSY DAFERSCIGM NSCSVTVAPE IFGGDPCPSV MKKLSVEAIC 840 S* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 8.0e-6 | 52 | 188 | 155 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 1.0e-21 | 763 | 840 | 82 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 4.0e-24 | 30 | 332 | 370 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 4.0e-163 | 36 | 342 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 24 | 841 | 819 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK96254.1 | 0 | 23 | 841 | 26 | 846 | unknown [Populus trichocarpa x Populus deltoides] |
| EMBL | CAC44500.1 | 0 | 26 | 841 | 26 | 843 | beta-galactosidase [Fragaria x ananassa] |
| EMBL | CBI35944.1 | 0 | 1 | 841 | 1 | 841 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279310.1 | 0 | 60 | 841 | 1 | 782 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327432.1 | 0 | 23 | 841 | 19 | 839 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 0 | 34 | 338 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 9.99995e-41 | 30 | 412 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 9.99995e-41 | 30 | 412 | 11 | 405 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
