| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01017132001 |
| Family | GT4 |
| Protein Properties | Length: 684 Molecular Weight: 76445.2 Isoelectric Point: 10.6808 |
| Chromosome | Chromosome/Scaffold: 9 Start: 4464848 End: 4472977 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT4 | 447 | 653 | 1.3e-24 |
| DMLLLSLSSINPGKGQFFLLESVRSMIEQEPSQDDPELKDLVKIGQDQSNFSGKHYSRALLQNLNGPKSKNLMLPKQALKVLIGSVGSKSNKVPYVKGLL RFLTRHSNLSKSVLWTPATTRVASLYSAADVYVINSQGMGETFGRVTIEAMAFGLPVLGTDAGGTKEVVEQNVTGLLHPVGHLGTQILSENIRFLLKNPS SREQMGK | |||
| Full Sequence |
|---|
| Protein Sequence Length: 684 Download |
| MEEGNGRGDF HGNVVRQSSL RPGGSLKSTL SGRSTPRNSP SFRRSHSSRT PRREARSSGV 60 GSQWFRNNRV VFWLILITLW AYLGFYVQSK WAHGDNNEDI IGFGGKPNNG ISDSELNRKA 120 PLIANDKLLA VKNGSDKNPV GSGKKVDVVL AKKGNSVPSR RSASSKKRSK KSERSLRGKT 180 RKQKTKTEVE VTEMDEQEQE IPKLNTSYGL LVGPFGSTED RILEWSPEKR SGTCDRRGEL 240 ARLVWSRKFV LIFHELSMTG APLSMMELAT ELLSCGATVS AVVLSKKGGL MPELARRRIK 300 VLEDRADLSF KTAMKADLVI AGSAVCASWI EQYIAHFTAG SSQIVWWIME NRREYFDRSK 360 LVINRVKMLI FLSESQSKQW LTWCKEENIR LISQPAVVPL SVNDELAFVA GITCSLNTPS 420 FTTEKMQEKR RLLRDSIRKE MGLTDTDMLL LSLSSINPGK GQFFLLESVR SMIEQEPSQD 480 DPELKDLVKI GQDQSNFSGK HYSRALLQNL NGPKSKNLML PKQALKVLIG SVGSKSNKVP 540 YVKGLLRFLT RHSNLSKSVL WTPATTRVAS LYSAADVYVI NSQGMGETFG RVTIEAMAFG 600 LPVLGTDAGG TKEVVEQNVT GLLHPVGHLG TQILSENIRF LLKNPSSREQ MGKRGRKKVE 660 RMYLKRHMYK RLAEVLYKCM RIK* 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03798 | GT1_wlbH_like | 3.0e-19 | 546 | 679 | 136 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| COG0438 | RfaG | 4.0e-20 | 540 | 683 | 146 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
| cd03825 | GT1_wcfI_like | 2.0e-20 | 566 | 672 | 114 | + This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. | ||
| cd03808 | GT1_cap1E_like | 8.0e-24 | 554 | 674 | 121 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03801 | GT1_YqgM_like | 4.0e-28 | 546 | 677 | 134 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN71826.1 | 0 | 1 | 683 | 1 | 734 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36173.1 | 0 | 1 | 683 | 1 | 683 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284822.1 | 0 | 15 | 683 | 4 | 691 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298139.1 | 0 | 1 | 683 | 1 | 681 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528176.1 | 0 | 1 | 683 | 1 | 686 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jjm_L | 0.0000000006 | 549 | 681 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_K | 0.0000000006 | 549 | 681 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_J | 0.0000000006 | 549 | 681 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_I | 0.0000000006 | 549 | 681 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
| PDB | 2jjm_H | 0.0000000006 | 549 | 681 | 259 | 387 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
