y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01017331001 |
Family | GH17 |
Protein Properties | Length: 400 Molecular Weight: 43643.1 Isoelectric Point: 6.6352 |
Chromosome | Chromosome/Scaffold: 9 Start: 6780762 End: 6782814 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 41 | 359 | 0 |
GINYGRIADNIPSPESVVTLLKAAKIKNVRIYDANHDVLTAFKGSGIEIIVGLGNEFLKQISVGEDHAIDWIKENVQPFLPGTKIRGIAVGNEVLGSTDP ELWEVLLNAVKNVYSAVSRLHLADDIEVSSPHSEAVFANSFPPSACIFKETLLPYMKPLLQFFSQIGSPFYINAYPFLAYMSDPEHIDLNYALFQSNPGI YDSKTNLHYDNMFDAQVDAAYAALEKAGFAKMEVIVSETGWASKGDATEAGATVKNARTYNYNLRKRLMKKKGTPYRPKIAVKAYIFALFNENLKPGPTS ERNFGLFKADGSISYDIGF |
Full Sequence |
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Protein Sequence Length: 400 Download |
MLLPVQFASN QMGFSSLFFL LFLLLLSPID LSVHAFTGTY GINYGRIADN IPSPESVVTL 60 LKAAKIKNVR IYDANHDVLT AFKGSGIEII VGLGNEFLKQ ISVGEDHAID WIKENVQPFL 120 PGTKIRGIAV GNEVLGSTDP ELWEVLLNAV KNVYSAVSRL HLADDIEVSS PHSEAVFANS 180 FPPSACIFKE TLLPYMKPLL QFFSQIGSPF YINAYPFLAY MSDPEHIDLN YALFQSNPGI 240 YDSKTNLHYD NMFDAQVDAA YAALEKAGFA KMEVIVSETG WASKGDATEA GATVKNARTY 300 NYNLRKRLMK KKGTPYRPKI AVKAYIFALF NENLKPGPTS ERNFGLFKAD GSISYDIGFT 360 GLTSAASSLK VTGAGGWFQS SYLVVFATCA AVVPLALTS* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 3.0e-98 | 41 | 359 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN70046.1 | 0 | 28 | 389 | 17 | 373 | hypothetical protein [Vitis vinifera] |
EMBL | CBI36326.1 | 0 | 1 | 399 | 1 | 399 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002265779.1 | 0 | 30 | 368 | 20 | 358 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299750.1 | 0 | 31 | 366 | 8 | 343 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327527.1 | 0 | 33 | 369 | 1 | 338 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 41 | 360 | 3 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_C | 0 | 41 | 360 | 3 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_B | 0 | 41 | 360 | 3 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3f55_A | 0 | 41 | 360 | 3 | 316 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3em5_D | 0 | 41 | 360 | 3 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |