| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01017658001 |
| Family | GH3 |
| Protein Properties | Length: 746 Molecular Weight: 82299.6 Isoelectric Point: 5.1485 |
| Chromosome | Chromosome/Scaffold: 5 Start: 2414688 End: 2417615 |
| Description | beta-xylosidase 3 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 99 | 345 | 0 |
| GVRRLGLPEYSWWSEALHGISNLGPGVFFDETIPGATSLPTVILSTAAFNQTLWKTLGRVVSTEGRAMYNLGHAGLTFWSPNINVVRDTRWGRTQETSGE DPFIVGEFAVNYVRGLQDVEGTENVSSCCKHYAAYDIDSWLNVDRHTFDARVSEQDMKETFVSPFERCVREGDVSSVMCSFNKINGIPPCSDPRLLKGVI RDEWDLHGYIVSDCYGLEVIVDNQNYLNDSKVDAVAKTLQAGLDLEC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 746 Download |
| MATGFRFLLF CLSMLSVASW AVSTGQSRLL MDDFVGEYGD LAKNYTYVCD ESRYALLGLD 60 MKSFAFCDKS LSYKERAKDL VSRMTLQEKV MQSVHTASGV RRLGLPEYSW WSEALHGISN 120 LGPGVFFDET IPGATSLPTV ILSTAAFNQT LWKTLGRVVS TEGRAMYNLG HAGLTFWSPN 180 INVVRDTRWG RTQETSGEDP FIVGEFAVNY VRGLQDVEGT ENVSSCCKHY AAYDIDSWLN 240 VDRHTFDARV SEQDMKETFV SPFERCVREG DVSSVMCSFN KINGIPPCSD PRLLKGVIRD 300 EWDLHGYIVS DCYGLEVIVD NQNYLNDSKV DAVAKTLQAG LDLECGHYYT DALNESVLTG 360 KVSQYELDRA LKNIYVLLMR VGYFDGIPAY ESLGLKDICA ADHIELAREA ARQGIVLLKN 420 DYEVLPLKPG KKIALVGPHA NATEVMIGNY AGLPCKYVSP LEAFSAIGNV TYATGFTIIF 480 VGTDLSIEAE FVDRVDFLLP GNQTELIKQV AEVSSGPVIL VVLSGSNIDI TFAKNNPRIS 540 AILWVGFPGE QGGHAIADVV FGKYNPGGRL PVTWYEADYV DMLPMSSMSL RPVDELGYPG 600 RTYKFFDGST VYPFGYGMSY TKFSYSLATS KISIDIDLNK FQKCRTFEVA VTNVGMVDGS 660 EVLMVYSIPP SGIVGTHIKQ VIGFQKVFVA AGDTERVKFS MNACKSLRIV DSTGYSLLPS 720 GSHTIRVGDY SNSASYSLQV NYHYH* 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01915 | Glyco_hydro_3_C | 1.0e-52 | 415 | 621 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 6.0e-54 | 59 | 459 | 417 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 4.0e-60 | 88 | 375 | 292 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 2.0e-74 | 79 | 702 | 718 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 63 | 735 | 741 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI25987.1 | 0 | 1 | 745 | 1 | 745 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI25988.1 | 0 | 1 | 743 | 1 | 773 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274591.1 | 0 | 1 | 745 | 1 | 805 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002274619.1 | 0 | 1 | 743 | 1 | 804 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002274651.1 | 0 | 1 | 742 | 1 | 807 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 123 | 701 | 78 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u48_A | 0 | 123 | 701 | 78 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u4a_B | 0 | 123 | 701 | 78 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 3u4a_A | 0 | 123 | 701 | 78 | 696 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| PDB | 2x41_A | 1.4013e-45 | 75 | 733 | 2 | 704 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
