y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01017659001 |
Family | GH3 |
Protein Properties | Length: 775 Molecular Weight: 84820.4 Isoelectric Point: 5.3051 |
Chromosome | Chromosome/Scaffold: 5 Start: 2419711 End: 2422722 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 100 | 356 | 0 |
GVPRIGLPPYKWWSEALHGVANVGSATFFDEVVPGATSFPNVILSAASFNQSLWKTLGQVVSTEARAMYNLGHAGLTFWSPNINVARDPRWGRILETPGE DPLTVGVYGVNYVRGLQDIEGTENTTDLNSRPLKIASSCKHFAAYDLDQWFNVDRRHFDAKVSEQDMTETFLRPFEMCVKEGDTSSVMCSFNNINGIPPC ADPRFLKGVIREQWNLHGYIVSDCWAIDTIVQDQKFLDVTSEEGVALSMKAGLDLEC |
Full Sequence |
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Protein Sequence Length: 775 Download |
MAKSFTRLFF SLSILAIAFL AVSTARYTPR PNSRFLSQAF DVPGNYTYVC DASRFAALGL 60 DMKDFVYCDS SLPYDVRVKD LVDRITLEEK ARNVIDVASG VPRIGLPPYK WWSEALHGVA 120 NVGSATFFDE VVPGATSFPN VILSAASFNQ SLWKTLGQVV STEARAMYNL GHAGLTFWSP 180 NINVARDPRW GRILETPGED PLTVGVYGVN YVRGLQDIEG TENTTDLNSR PLKIASSCKH 240 FAAYDLDQWF NVDRRHFDAK VSEQDMTETF LRPFEMCVKE GDTSSVMCSF NNINGIPPCA 300 DPRFLKGVIR EQWNLHGYIV SDCWAIDTIV QDQKFLDVTS EEGVALSMKA GLDLECGHYY 360 NDSLATAVRE GRVSEHDVDK SLSYLYVVLM RVGFFDGIPS LASLGKKDIC NDEHIELARE 420 AARQGIVLLK NDNATLPLKP VKKLALVGPH ANATVAMIGN YAGIPCHYVS PLDAFSELGD 480 VTYEVGCADV KCHNDTHVYK AAEAAKNADA TIILVGTDLS IEAEERDRED LLLPGYQTEM 540 VNQVTDLSTG PVILVVMCGG PIDISFAKNN PKIAAILWAG FPGEQGGNAI ADIVFGKYNP 600 GGRSPITWYE NGYVGMLPMT SMALRPIESL GYPGRTYKFF NGSTVYPFGY GLSYTNFSYS 660 LTAPTRSVHI SLTSFEFQVA VKNVGSMDGS EVVMVYSSPP SGIVGTHIKQ VIGFERVFVK 720 VGNTEKVKFS MNVCKSLGLV DSSGYILLPS GSHTIMAGDN STSVSFPFQV NYHN* 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-40 | 426 | 655 | 237 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 8.0e-48 | 98 | 465 | 374 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-55 | 89 | 381 | 297 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-70 | 127 | 733 | 661 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 64 | 768 | 746 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25988.1 | 0 | 1 | 774 | 1 | 774 | unnamed protein product [Vitis vinifera] |
EMBL | CBI25989.1 | 0 | 1 | 774 | 1 | 746 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274591.1 | 0 | 1 | 773 | 1 | 803 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 1 | 774 | 1 | 805 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 1 | 774 | 1 | 809 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 136 | 761 | 91 | 725 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u48_A | 0 | 136 | 761 | 91 | 725 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_B | 0 | 136 | 761 | 91 | 725 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3u4a_A | 0 | 136 | 761 | 91 | 725 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 2x41_A | 0 | 77 | 766 | 3 | 707 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |