| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01017808001 |
| Family | GH14 |
| Protein Properties | Length: 450 Molecular Weight: 49720.4 Isoelectric Point: 7.443 |
| Chromosome | Chromosome/Scaffold: 5 Start: 3615706 End: 3618981 |
| Description | beta-amylase 3 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 89 | 441 | 0 |
| YVGLPLDIVSDCNTLNQVKAVSAGLKALKLMGVDGVELPVWWGIAEKEAMGKYDWSGYLAVAEMVQKMGLKLHVSLCFHASKQPKVSLPQWVSQIGEVQP DIFHTDRLGQHYKECLSLAVDDLPVLDGKTPIQVYHDFCESFKTSFSHFMGSTITGISMGLGPDGELRYPSHHRVSKRGKVPGVGEFQCYDKNMLSLLKQ HAEATGNPYWGLGGPHDAPQYDGMPNSNNFFREHGGSWETPYGDFFLSWYSNQLISHGSSLLSLASTVFCNSPVAISGKVPVVHSWYKTRSHPSELTAGF YNTVDKDGYERIAEIFAKNSCKMILPGMDLSDDHQPQESLSSPELLLAQINSD | |||
| Full Sequence |
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| Protein Sequence Length: 450 Download |
| MEALVIGTSQ AQIGRARLAY RKLGFYNPAA QGFSRTTRIC FDHSQRWRTD GVRLSLNAVH 60 SEVLRSEKVS GDVSTSARRS KPVDGVRLYV GLPLDIVSDC NTLNQVKAVS AGLKALKLMG 120 VDGVELPVWW GIAEKEAMGK YDWSGYLAVA EMVQKMGLKL HVSLCFHASK QPKVSLPQWV 180 SQIGEVQPDI FHTDRLGQHY KECLSLAVDD LPVLDGKTPI QVYHDFCESF KTSFSHFMGS 240 TITGISMGLG PDGELRYPSH HRVSKRGKVP GVGEFQCYDK NMLSLLKQHA EATGNPYWGL 300 GGPHDAPQYD GMPNSNNFFR EHGGSWETPY GDFFLSWYSN QLISHGSSLL SLASTVFCNS 360 PVAISGKVPV VHSWYKTRSH PSELTAGFYN TVDKDGYERI AEIFAKNSCK MILPGMDLSD 420 DHQPQESLSS PELLLAQINS DKNLQMQVA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 4.0e-87 | 42 | 419 | 389 | + beta-amylase | ||
| PLN02801 | PLN02801 | 4.0e-95 | 86 | 406 | 328 | + beta-amylase | ||
| PLN02161 | PLN02161 | 1.0e-95 | 57 | 421 | 380 | + beta-amylase | ||
| PLN00197 | PLN00197 | 6.0e-110 | 85 | 406 | 327 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 3.0e-112 | 57 | 420 | 369 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAI39245.1 | 0 | 1 | 449 | 1 | 447 | beta-amylase [Glycine max] |
| EMBL | CAN66037.1 | 0 | 1 | 440 | 1 | 440 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI26116.1 | 0 | 1 | 449 | 1 | 449 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002276777.1 | 0 | 1 | 440 | 1 | 440 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002516865.1 | 0 | 1 | 440 | 1 | 446 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1b1y_A | 0 | 86 | 440 | 6 | 362 | A Chain A, Sevenfold Mutant Of Barley Beta-Amylase |
| PDB | 1fa2_A | 0 | 86 | 440 | 13 | 370 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1q6g_A | 0 | 86 | 440 | 12 | 368 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (N340t) With Increased Ph Optimum |
| PDB | 1q6d_A | 0 | 86 | 440 | 12 | 368 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 1uko_D | 0 | 86 | 440 | 12 | 368 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CA814925 | 267 | 4 | 270 | 0 |
| CA815746 | 284 | 110 | 388 | 0 |
| CB972106 | 238 | 185 | 422 | 0 |
| EE087272 | 252 | 22 | 273 | 0 |
| CB981548 | 245 | 196 | 440 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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