Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01018620001 |
Family | CE8 |
Protein Properties | Length: 256 Molecular Weight: 28124.8 Isoelectric Point: 10.2872 |
Chromosome | Chromosome/Scaffold: 16 Start: 12134008 End: 12136119 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 2 | 239 | 0 |
KKTIITGSRSVRGGYTTYNSATAGIQGLRFIARGITFKNTAGPKNGQAVALRSSSDLSVFYHCAFQGYQDTLMVHSQRQFYRECYIYGTIDFIFGNAAVV FQQCMIFARRPLQGQANVITAQGRGDPYQNTGISIHNSRILAASDLKPVVGSFKTYLGRPWQQYSRTVILKTYLDSLVDPSGWSPWGTSNFAQSTLYYGE YQNFGPSSSTRNRVKWSGYHVITSATVASRFTVGSFIA |
Full Sequence |
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Protein Sequence Length: 256 Download |
MKKTIITGSR SVRGGYTTYN SATAGIQGLR FIARGITFKN TAGPKNGQAV ALRSSSDLSV 60 FYHCAFQGYQ DTLMVHSQRQ FYRECYIYGT IDFIFGNAAV VFQQCMIFAR RPLQGQANVI 120 TAQGRGDPYQ NTGISIHNSR ILAASDLKPV VGSFKTYLGR PWQQYSRTVI LKTYLDSLVD 180 PSGWSPWGTS NFAQSTLYYG EYQNFGPSSS TRNRVKWSGY HVITSATVAS RFTVGSFIAG 240 QSWLPATGVP FTSGL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 7.0e-123 | 1 | 255 | 255 | + pectinesterase/pectinesterase inhibitor | ||
PLN02916 | PLN02916 | 1.0e-123 | 1 | 255 | 255 | + pectinesterase family protein | ||
PLN02713 | PLN02713 | 6.0e-129 | 3 | 255 | 253 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02995 | PLN02995 | 3.0e-146 | 1 | 255 | 256 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-146 | 1 | 240 | 240 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24581.1 | 0 | 1 | 255 | 1 | 255 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264861.1 | 0 | 1 | 255 | 269 | 523 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
RefSeq | XP_002318284.1 | 0 | 1 | 255 | 272 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322402.1 | 0 | 1 | 255 | 270 | 524 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 1 | 255 | 272 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 4 | 255 | 69 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 1 | 255 | 62 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 8e-17 | 18 | 206 | 85 | 308 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 8e-17 | 18 | 206 | 85 | 308 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 9e-17 | 18 | 206 | 85 | 308 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |