| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01018622001 |
| Family | CE8 |
| Protein Properties | Length: 261 Molecular Weight: 28681.3 Isoelectric Point: 9.6188 |
| Chromosome | Chromosome/Scaffold: 16 Start: 12106453 End: 12109166 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 1 | 244 | 0 |
| MLVGDGLRNTIITGSRSVGGGFTTFNSATVAVTGEGFIARGITFRNTAGPQNHQAVALRSGSDLSVFYQCSFEGYQDTLYVHSQRQFYKECYIYGTVDFI FGNAAVVLQNCMIYARRPMDKQKNVVTAQGRTDPNQNTGISIHNSRVMAATDLKPVLSSFKTYLGRPWKEYSRTVYLGTYLDTLVDSAGWLEWDGNFALN TLYYGEYKNFGPGSSTSGRVKWRGYRVITSATEASKFSVANFIA | |||
| Full Sequence |
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| Protein Sequence Length: 261 Download |
| MLVGDGLRNT IITGSRSVGG GFTTFNSATV AVTGEGFIAR GITFRNTAGP QNHQAVALRS 60 GSDLSVFYQC SFEGYQDTLY VHSQRQFYKE CYIYGTVDFI FGNAAVVLQN CMIYARRPMD 120 KQKNVVTAQG RTDPNQNTGI SIHNSRVMAA TDLKPVLSSF KTYLGRPWKE YSRTVYLGTY 180 LDTLVDSAGW LEWDGNFALN TLYYGEYKNF GPGSSTSGRV KWRGYRVITS ATEASKFSVA 240 NFIAGQSWLP ATGVPFRSGL * 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03043 | PLN03043 | 6.0e-137 | 1 | 260 | 260 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| PLN02484 | PLN02484 | 2.0e-139 | 1 | 260 | 260 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-144 | 1 | 260 | 260 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 1.0e-148 | 1 | 260 | 260 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 3.0e-168 | 1 | 245 | 245 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI24582.1 | 0 | 1 | 260 | 1 | 260 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265104.1 | 0 | 1 | 260 | 235 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318285.1 | 0 | 1 | 260 | 261 | 520 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322401.1 | 0 | 1 | 260 | 258 | 517 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510940.1 | 0 | 1 | 260 | 196 | 455 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 1 | 260 | 60 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 1 | 260 | 56 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 7e-24 | 16 | 250 | 77 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 7e-24 | 16 | 250 | 77 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 7e-24 | 16 | 250 | 77 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV133146 | 236 | 25 | 260 | 0 |
| EH672663 | 234 | 1 | 234 | 0 |
| FQ474963 | 202 | 60 | 261 | 0 |
| DT753981 | 236 | 26 | 261 | 0 |
| DT740901 | 261 | 1 | 261 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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