Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01019523001 |
Family | CBM49 |
Protein Properties | Length: 630 Molecular Weight: 69015.9 Isoelectric Point: 8.8985 |
Chromosome | Chromosome/Scaffold: 2 Start: 1331283 End: 1335833 |
Description | glycosyl hydrolase 9C2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM49 | 537 | 614 | 1.3e-38 |
IAIEQKLTTSWKAKGNTYNRYSTIVTNKSAKTLKDLELTISKLYGPLWGLTKSGDSYGFPSWLKALAAGEKLEFVYIH | |||
GH9 | 30 | 491 | 0 |
DYGQALTKGILFFEAQRSGYLPSNQRVKWRADSGLHDGKASGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWSIVEYGKQMAANGELGHAMEAVKWGTDYL IKAHPHPDVLYGEVGDGNTDHFCWQRPEDMTTDRRAYKIDPSNPGSDLAGETAAAMAAASIVFRRSNPSYANELLTHARQLFEFGDKYRGKYDSSITVAQ KYYRSYSGYADELLWAAAWLYQATNNQYYLSYLGNNGQSLGGTGWSMTEFGWDAKYAGVQVLVAKMLMQGKGGRYTSVFQQYQQKAEFFMCSCLGKGTRN IQKTPGGLLYRQRWNNMQFVTSASFLVTVYSDYLASAGKNLNCAAGSVSPSGLISFAKSQVDYILGDNPRATSYMVGYGNNYPRQVHHRGSSIVSIKVNP SFVSCRGGYATWFSRKGSDPNLLTGAIVGGPDAYDNFADERDNYEQTEPATYNNAPLIGLLA |
Full Sequence |
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Protein Sequence Length: 630 Download |
MEKLLRLITM APLFLQMLLV SFPFAFAGHD YGQALTKGIL FFEAQRSGYL PSNQRVKWRA 60 DSGLHDGKAS GVDLVGGYYD AGDNVKFGLP MAFTVTMMSW SIVEYGKQMA ANGELGHAME 120 AVKWGTDYLI KAHPHPDVLY GEVGDGNTDH FCWQRPEDMT TDRRAYKIDP SNPGSDLAGE 180 TAAAMAAASI VFRRSNPSYA NELLTHARQL FEFGDKYRGK YDSSITVAQK YYRSYSGYAD 240 ELLWAAAWLY QATNNQYYLS YLGNNGQSLG GTGWSMTEFG WDAKYAGVQV LVAKMLMQGK 300 GGRYTSVFQQ YQQKAEFFMC SCLGKGTRNI QKTPGGLLYR QRWNNMQFVT SASFLVTVYS 360 DYLASAGKNL NCAAGSVSPS GLISFAKSQV DYILGDNPRA TSYMVGYGNN YPRQVHHRGS 420 SIVSIKVNPS FVSCRGGYAT WFSRKGSDPN LLTGAIVGGP DAYDNFADER DNYEQTEPAT 480 YNNAPLIGLL ARLSGGHGGY NQLLPVVLPA PKEVVTQPKS APTPKVTPAP ASTSAEIAIE 540 QKLTTSWKAK GNTYNRYSTI VTNKSAKTLK DLELTISKLY GPLWGLTKSG DSYGFPSWLK 600 ALAAGEKLEF VYIHSADPAE VSVSSYTLA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02171 | PLN02171 | 0 | 1 | 629 | 630 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 1 | 626 | 629 | + endoglucanase | ||
PLN02420 | PLN02420 | 0 | 4 | 493 | 493 | + endoglucanase | ||
PLN00119 | PLN00119 | 0 | 30 | 494 | 465 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 30 | 491 | 464 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005576 | extracellular region |
GO:0005975 | carbohydrate metabolic process |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAI68019.1 | 0 | 1 | 629 | 1 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
EMBL | CAI68020.1 | 0 | 1 | 629 | 1 | 620 | endo-beta-1,4-glucanase [Prunus persica] |
RefSeq | XP_002270880.1 | 0 | 1 | 629 | 1 | 629 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002299478.1 | 0 | 1 | 629 | 1 | 622 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002303645.1 | 0 | 1 | 628 | 1 | 621 | glycosyl hydrolase family 9 [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 29 | 493 | 3 | 428 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ksc_A | 0 | 29 | 493 | 3 | 428 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ks8_A | 0 | 29 | 493 | 3 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 23 | 493 | 18 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 30 | 550 | 5 | 492 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |