| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01019680001 |
| Family | GT5 |
| Protein Properties | Length: 660 Molecular Weight: 72148.2 Isoelectric Point: 8.3615 |
| Chromosome | Chromosome/Scaffold: 2 Start: 2417892 End: 2422350 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 135 | 631 | 0 |
| LVFVGCEVGPWSKTGGLGDVLGGLPPAMAARGHRVMSVSPRYDQYKDAWDTCVVVEIPVGDRIETVRFFHCYKRGVDRVFVDHPWFLEKVWGKTGSKIYG PSAGVDYIDNQMRFSLFCQAVLEAPRILNLNSSKYFSGPYGEDVVFIANDWHTAILPCYLKSMYQSSGIYRNAKVVFCIHNIAYQGRFAFSDFGFLNLPD RFKSSFDFMDGYKKPVKGRKINWMKAGILEADRVVTVSPYYAEELVSGEAKGVELDNIIRKATITGIVNGMDVQEWNPSTDKHIGIHYNATTVMDAKALL KEALQAEVGLPVDRNIPLIGFIGRLEEQKGSDILAAAIPKFIDEDVQIVVLGTGKKAMEKQIEQLEIKYPNKAIGVAKFNVSLAHMITAGADFMLIPSRF EPCGLIQLHAMRYGTVPICAATGGLVDTVKEGFTGFHMGPFNVECDRIDPADVDAVAITVKRALATYGTAALGEMIQNCMALDLSWKGPSKNWEELL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 660 Download |
| MYRGPTSTIL RQITPTTFPC GLSTLSTTFF LPCLLALARF FSITVSTNCF GFRKMATLTA 60 SHFVSRTSHV NGTQESSGSE TKSLAQIGLR GQRATHNGLR RLSARTTVGR SKGYKSENGK 120 GLPSGAIVCR SGMNLVFVGC EVGPWSKTGG LGDVLGGLPP AMAARGHRVM SVSPRYDQYK 180 DAWDTCVVVE IPVGDRIETV RFFHCYKRGV DRVFVDHPWF LEKVWGKTGS KIYGPSAGVD 240 YIDNQMRFSL FCQAVLEAPR ILNLNSSKYF SGPYGEDVVF IANDWHTAIL PCYLKSMYQS 300 SGIYRNAKVV FCIHNIAYQG RFAFSDFGFL NLPDRFKSSF DFMDGYKKPV KGRKINWMKA 360 GILEADRVVT VSPYYAEELV SGEAKGVELD NIIRKATITG IVNGMDVQEW NPSTDKHIGI 420 HYNATTVMDA KALLKEALQA EVGLPVDRNI PLIGFIGRLE EQKGSDILAA AIPKFIDEDV 480 QIVVLGTGKK AMEKQIEQLE IKYPNKAIGV AKFNVSLAHM ITAGADFMLI PSRFEPCGLI 540 QLHAMRYGTV PICAATGGLV DTVKEGFTGF HMGPFNVECD RIDPADVDAV AITVKRALAT 600 YGTAALGEMI QNCMALDLSW KGPSKNWEEL LLSLGPAGCQ PGIEGEEIAP LAKENVATP* 660 720 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 3.0e-78 | 138 | 634 | 523 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 5.0e-102 | 133 | 630 | 516 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 1.0e-126 | 133 | 630 | 511 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 1.0e-163 | 133 | 634 | 510 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-170 | 134 | 631 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACH72975.1 | 0 | 55 | 659 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACM78591.1 | 0 | 55 | 659 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| EMBL | CBI34608.1 | 0 | 1 | 659 | 1 | 659 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | O82627 | 0 | 55 | 659 | 1 | 608 | SSG1_ANTMA RecName: Full=Granule-bound starch synthase 1, chloroplastic/amyloplastic; AltName: Full=Granule-bound starch synthase I; Short=GBSS-I; Flags: Precursor |
| RefSeq | XP_002279034.1 | 0 | 55 | 659 | 1 | 605 | PREDICTED: similar to granule-bound starch synthase [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 133 | 659 | 10 | 536 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
| PDB | 3vue_A | 0 | 133 | 659 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 133 | 634 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 133 | 634 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 133 | 634 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
