| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01020553001 |
| Family | GH5 |
| Protein Properties | Length: 433 Molecular Weight: 49433.3 Isoelectric Point: 8.5158 |
| Chromosome | Chromosome/Scaffold: 12 Start: 4449171 End: 4452824 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 51 | 377 | 1.7e-35 |
| DGKVFYINGWNSYWLMDQAVDEYSKPRVRAMLQAGAKMGLTVCRTWAFNDGAYHALQISPGRFDERVFKALDHVIAEARKQGIRLLLTLVNNLQAYGGKT QYVNWAWQEGIGLSSSNDSFFFDPSIRIYFKNYVKAVLTRKNSITGIEYRNDPTIFGWELINEPRCMSDASGDTLQDWLEEMSAYVKSIDKKHLLTIGLE GFYGPNSPKRLTVNPAEWAATLGADFIRNSKISTIDFASAHIYPDHWFHGQEFEAELKYVSKWMLSHIEDGEKELKKPVMFTEFGFSTDNKNFHPSKRDR FFKTVFDVMYQSARKNGAGAGSFVWQF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 433 Download |
| MMAGNGLFYP IIGFASVFAF IYMSFGDLKI NLSEETKMSF VGRNGTQFMV DGKVFYINGW 60 NSYWLMDQAV DEYSKPRVRA MLQAGAKMGL TVCRTWAFND GAYHALQISP GRFDERVFKA 120 LDHVIAEARK QGIRLLLTLV NNLQAYGGKT QYVNWAWQEG IGLSSSNDSF FFDPSIRIYF 180 KNYVKAVLTR KNSITGIEYR NDPTIFGWEL INEPRCMSDA SGDTLQDWLE EMSAYVKSID 240 KKHLLTIGLE GFYGPNSPKR LTVNPAEWAA TLGADFIRNS KISTIDFASA HIYPDHWFHG 300 QEFEAELKYV SKWMLSHIED GEKELKKPVM FTEFGFSTDN KNFHPSKRDR FFKTVFDVMY 360 QSARKNGAGA GSFVWQFLVG GMEEYNDDFG IVPWERPATY RLITEHTCRL ARIQGGLAQQ 420 KASLKDLCSR RR* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam12876 | Cellulase-like | 0.0001 | 198 | 257 | 77 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
| pfam00150 | Cellulase | 6.0e-5 | 201 | 375 | 176 | + Cellulase (glycosyl hydrolase family 5). | ||
| COG2730 | BglC | 7.0e-7 | 21 | 386 | 396 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| COG3934 | COG3934 | 3.0e-25 | 53 | 401 | 352 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK95966.1 | 0 | 1 | 432 | 4 | 435 | unknown [Populus trichocarpa] |
| GenBank | ACN78665.1 | 0 | 1 | 432 | 13 | 443 | endo-beta-mannanase [Malus x domestica] |
| EMBL | CBI21857.1 | 0 | 1 | 432 | 1 | 432 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273772.1 | 0 | 1 | 432 | 6 | 437 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002330687.1 | 0 | 1 | 432 | 4 | 435 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 39 | 413 | 5 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 49 | 393 | 21 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
