y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01020664001 |
Family | CBM43 |
Protein Properties | Length: 175 Molecular Weight: 18357.9 Isoelectric Point: 5.5121 |
Chromosome | Chromosome/Scaffold: 12 Start: 3295350 End: 3297158 |
Description | plasmodesmata callose-binding protein 5 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 36 | 119 | 4.5e-31 |
WCVAKNNADNPALQTALDWACGPGGADCSPIQQGGPCYDSQDLQKTASFAFNDYYLKHGLSDDSCGFDNTAALTSLNPSFGNCK |
Full Sequence |
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Protein Sequence Length: 175 Download |
MKFSLFLFLL LTVTLPLHSL AAQSKAQNGV VTLELWCVAK NNADNPALQT ALDWACGPGG 60 ADCSPIQQGG PCYDSQDLQK TASFAFNDYY LKHGLSDDSC GFDNTAALTS LNPSFGNCKF 120 PSSFTVSNGS FVGSTNTMGM GPASADLSGC SRIAGRWVQA LITVHLLIAV ILIL* 180 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-17 | 35 | 106 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-31 | 35 | 120 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_567060.1 | 0 | 30 | 174 | 35 | 177 | PDCB5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5); callose binding / polysaccharide binding [Arabidopsis thaliana] |
RefSeq | XP_002279275.1 | 0 | 1 | 174 | 1 | 174 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002326029.1 | 0 | 3 | 152 | 5 | 152 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002327206.1 | 0 | 34 | 155 | 1 | 122 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525141.1 | 0 | 27 | 155 | 23 | 154 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000000000006 | 36 | 122 | 13 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |