y
Basic Information | |
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Species | Vitis vinifera |
Cazyme ID | GSVIVT01020995001 |
Family | GH35 |
Protein Properties | Length: 1065 Molecular Weight: 119296 Isoelectric Point: 7.7829 |
Chromosome | Chromosome/Scaffold: 5 Start: 15690674 End: 15841680 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 36 | 339 | 0 |
LLIDGKRRMLVSAGIHYPRATPEMWPDLIAKSKEGGADVIQTYVFWNGHEPVRRQYNFEGRYDIVKFVKLVGSSGLYLHLRIGPYVCAEWNFGGFPVWLR DIPGIEFRTDNAPFKDEMQRFVKKIVDLMQKEMLFSWQGGPIIMLQIENEYGNVESSFGQRGKDYVKWAARMALELDAGVPWVMCQQADAPDIIINACNG FYCDAFWPNSANKPKLWTEDWNGWFASWGGRTPKRPVEDIAFAVARFFQRGGSFHNYYMYFGGTNFGRSSGGPFYVTSYDYDAPIDEYGLLSQPKWGHLK ELHA |
Full Sequence |
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Protein Sequence Length: 1065 Download |
MFPGRALFAA LLCFSLTIQL GVSFAPFNVS YDHRALLIDG KRRMLVSAGI HYPRATPEMW 60 PDLIAKSKEG GADVIQTYVF WNGHEPVRRQ YNFEGRYDIV KFVKLVGSSG LYLHLRIGPY 120 VCAEWNFGGF PVWLRDIPGI EFRTDNAPFK DEMQRFVKKI VDLMQKEMLF SWQGGPIIML 180 QIENEYGNVE SSFGQRGKDY VKWAARMALE LDAGVPWVMC QQADAPDIII NACNGFYCDA 240 FWPNSANKPK LWTEDWNGWF ASWGGRTPKR PVEDIAFAVA RFFQRGGSFH NYYMYFGGTN 300 FGRSSGGPFY VTSYDYDAPI DEYGLLSQPK WGHLKELHAA IKLCEPALVA VDSPQYIKLG 360 PMQEVGVKNI CGPSFFRSFF GIGFLLKVEC SHYQMEVLSL TLAYSRGVLV AFLEIIGGEL 420 LQLSSSQLVL NLTLRWGYLH QWKALNSRSP SWEVKGLQEA RKASELVFRE RLQLPSSLCM 480 SGQTPIHCQS LITKGPLLTP IGPKIIRKEH YYARPPFGST VMLDLMPSSN TTCHEPRSNS 540 HFVMLKPANI LVLISTFAMV MDTKQTAHVY RVKESLYSTQ SGNGSSCSAF LANIDEHKTA 600 SVTFLGQIYK LPPWSVSILP DCRTTVFNTA KVGAQTSIKT NKISYVPKTW MTLKEPISVW 660 SENNFTIQGV LEHLNVTKDH SDYLWRITRI NVSAEDISFW EENQVSPTLS IDSMRDILHI 720 FVNGQLIGSV IGHWVKVVQP IQLLQGYNDL VLLSQTVGLQ NYGAFLEKDG AGFKGQVKLT 780 GFKNGEIDLS EYSWTYQVGL RGEFQKIYMI DESEKAEWTD LTPDASPSTF TWYKTFFDAP 840 NGENPVALDL GSMGKGQAWV NGHHIGRYWT RVAPKDGCGK CDYRGHYHTS KCATNCGNPT 900 QIWYHIPRSW LQASNNLLVL FEETGGKPFE ISVKSRSTQT ICAEVSESHY PSLQNWSPSD 960 FIDQNSKNKM TPEMHLQCDD GHTISSIEFA SYGTPQGSCQ MFSQGQCHAP NSLALVSKAC 1020 QGKGSCVIRI LNSAFGGDPC RGIVKTLAVE AKCAPSSTTS SSQL* 1080 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 2.0e-22 | 29 | 331 | 357 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 3.0e-26 | 976 | 1053 | 82 | + Galactose binding lectin domain. | ||
PLN03059 | PLN03059 | 6.0e-137 | 544 | 1054 | 516 | + beta-galactosidase; Provisional | ||
pfam01301 | Glyco_hydro_35 | 6.0e-159 | 35 | 341 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 4.0e-180 | 1 | 371 | 375 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI17270.1 | 0 | 1 | 1064 | 1 | 1064 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263385.1 | 0 | 1 | 370 | 1 | 370 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
RefSeq | XP_002263385.1 | 0 | 565 | 1064 | 363 | 882 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
RefSeq | XP_002518051.1 | 0 | 24 | 367 | 35 | 378 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002518051.1 | 0 | 544 | 1063 | 354 | 896 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 8.00141e-43 | 35 | 337 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.001 | 708 | 869 | 399 | 546 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-40 | 27 | 402 | 9 | 399 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-40 | 27 | 402 | 9 | 399 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |