| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01021055001 |
| Family | CBM43 |
| Protein Properties | Length: 221 Molecular Weight: 22231.5 Isoelectric Point: 6.4649 |
| Chromosome | Chromosome/Scaffold: 5 Start: 14513414 End: 14516745 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 50 | 131 | 5.6e-34 |
| WCVARSDASEQGLQTALDYACGSGADCTPIQTSGLCYLPNTLQAHASYAFNSFFQRKSMAPGSCDFAGTANIARTDPSYGSC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 221 Download |
| MAALAKVVAI MIASMAILAT VAGGATPVIG PTPVVGGGTT QIPAEGGASW CVARSDASEQ 60 GLQTALDYAC GSGADCTPIQ TSGLCYLPNT LQAHASYAFN SFFQRKSMAP GSCDFAGTAN 120 IARTDPSYGS CVYPSSLSTA GGMSTPASTP STPGVIYPPP SPISSTPLAG ISGGYNPGLG 180 PTVPTTNNSV TSMKLSVFSI LMHISFFLAL LFTFQPMLVF * 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 4.0e-21 | 49 | 119 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-38 | 49 | 133 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU17645.1 | 0 | 46 | 211 | 26 | 186 | unknown [Glycine max] |
| RefSeq | NP_001148424.1 | 0 | 48 | 210 | 28 | 186 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
| RefSeq | NP_193096.5 | 0 | 48 | 214 | 59 | 230 | unknown protein [Arabidopsis thaliana] |
| RefSeq | XP_002267551.1 | 0 | 1 | 220 | 1 | 220 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002518089.1 | 0 | 41 | 137 | 18 | 114 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 5e-22 | 45 | 135 | 8 | 98 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
