| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01021386001 |
| Family | CBM43 |
| Protein Properties | Length: 196 Molecular Weight: 19764.9 Isoelectric Point: 4.0104 |
| Chromosome | Chromosome/Scaffold: 10 Start: 4782434 End: 4783991 |
| Description | Carbohydrate-binding X8 domain superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CBM43 | 35 | 116 | 3.5e-33 |
| WCIASPAASETALQVAIDYACGYGGADCSAIQSSGSCYNPNTLRDHASYAFNDYYQKNPAPTSCVFGGTAQLSYTDPSSANC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 196 Download |
| MPTTTPTATP TTPTMPTTTP TTPTTTTPAA STGSWCIASP AASETALQVA IDYACGYGGA 60 DCSAIQSSGS CYNPNTLRDH ASYAFNDYYQ KNPAPTSCVF GGTAQLSYTD PSSANCRYAA 120 TSTSASVTPV TPATPATPMT PTGSTPTDIP SGSTVYGSEP TATPTLSLAV SMSSSSLLLF 180 TATCFLVSLL TANYV* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam07983 | X8 | 1.0e-17 | 34 | 104 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 3.0e-32 | 34 | 118 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK94231.1 | 0 | 10 | 195 | 119 | 304 | unknown [Populus trichocarpa] |
| EMBL | CBI30817.1 | 0 | 31 | 195 | 31 | 195 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271903.1 | 0 | 31 | 195 | 126 | 290 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002283721.1 | 4.2039e-45 | 35 | 137 | 99 | 201 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002519744.1 | 0 | 33 | 195 | 113 | 282 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2jon_A | 0.000000000000001 | 22 | 118 | 2 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FQ459651 | 169 | 31 | 196 | 0 |
| CN550472 | 88 | 31 | 118 | 0 |
| GE635169 | 86 | 33 | 118 | 2.94273e-44 |
| EB715235 | 85 | 34 | 118 | 1.00053e-42 |
| EX293226 | 88 | 31 | 118 | 3.00018e-42 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
