| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01021404001 |
| Family | GT5 |
| Protein Properties | Length: 1012 Molecular Weight: 115170 Isoelectric Point: 6.471 |
| Chromosome | Chromosome/Scaffold: 10 Start: 4955669 End: 5013956 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 515 | 1000 | 0 |
| HVIHIAAEMAPVAKVGGLGDVVSGLSRALQKKGHLVEIVLPKYDCMQYDRIRDLRVLDMELESYFDGRLFRNKVWVGTVEGLPVYFIEPHHPSKFFWRGT VYGEHDDFRRFSYFSRAALELLLQAGKKPDIIHCHDWQTAFVAPLYWDLYAPKGLNSARICFTCHNFEYQGTAPASEMASCGLDVHHLNRPDRMQDNSAH DRVNPVKGAIVFSNIVTTVSPTYAQEVRTSEGGRGLHSTLNSHSKKFIGILNGIDTDAWDPATDVYLKSQFNANDLQGKAENKEALRKHLGLSYADTRRP LVGCIARLVPQKGIHLIRHAIYRTLELGGQFVLLGSSPVPHIQVEFEGIANHFKGDDHIRLILKYDESLSHSIYAASDMFLIPSMFEPCGLTQMIAMRYG SIPIARKTGGLNDSVFDVDDDTIPLQFRNGYTFLNPDEQGLNGALERAFNHYKTNKESWQKLVKKDMNIDFSWESSALQYEEIYEK | |||
| Full Sequence |
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| Protein Sequence Length: 1012 Download |
| MAAKLSTCFL SHGWGSLDCK RSNGRFLAPS HRLLPASCKM RHRNFSSQHK RQQTKKVSPD 60 RRPTNSHFQS NGDEDTEPEN ALADGVSSLN QGTTPDDEDA DVDSHIAIEH INDNPLKHLT 120 VSEEMTPLGI NVKSGEQLSS FQLEDLVGML KNAEKNILLL NQARVRALQD LEKILTEKDA 180 LQGEINILEM RLAETNARIK VAAQEKIHVE ILEEQLVNLR NELSHRGVTE GSGADMHENW 240 NKAFDGVHSL GKELSLLRTE NVSLKDDILA LKEELSHVQK TDKRVVMLEK ERSFLESALK 300 ELEFKLVASQ EDVSKLSTLK FECKNLWDRV ENLQVLLDRA TDQADKAILV LEQNQELRKK 360 VDMLEESLEE ANVYKLSSEK MQQYNDLMQK KIKLLEERLD RSDEEILSYV KLYQESIKEF 420 QDTLNNLKEE SKRRALNEPV DDMPWDFWSR LLLIIDGWLL EKKISANDAK LLREMVWKRD 480 GRIRDAYLVC KDTNEHEAVA IFLKLTSSPK RSRLHVIHIA AEMAPVAKVG GLGDVVSGLS 540 RALQKKGHLV EIVLPKYDCM QYDRIRDLRV LDMELESYFD GRLFRNKVWV GTVEGLPVYF 600 IEPHHPSKFF WRGTVYGEHD DFRRFSYFSR AALELLLQAG KKPDIIHCHD WQTAFVAPLY 660 WDLYAPKGLN SARICFTCHN FEYQGTAPAS EMASCGLDVH HLNRPDRMQD NSAHDRVNPV 720 KGAIVFSNIV TTVSPTYAQE VRTSEGGRGL HSTLNSHSKK FIGILNGIDT DAWDPATDVY 780 LKSQFNANDL QGKAENKEAL RKHLGLSYAD TRRPLVGCIA RLVPQKGIHL IRHAIYRTLE 840 LGGQFVLLGS SPVPHIQVEF EGIANHFKGD DHIRLILKYD ESLSHSIYAA SDMFLIPSMF 900 EPCGLTQMIA MRYGSIPIAR KTGGLNDSVF DVDDDTIPLQ FRNGYTFLNP DEQGLNGALE 960 RAFNHYKTNK ESWQKLVKKD MNIDFSWESS ALQYEEIYEK SVARARATSL V* 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 1.0e-146 | 510 | 998 | 496 | + synthase/transferase | ||
| PLN02939 | PLN02939 | 0 | 1 | 1011 | 1011 | + transferase, transferring glycosyl groups | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 515 | 1000 | 491 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 514 | 1001 | 491 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| PRK00654 | glgA | 0 | 514 | 1004 | 493 | + glycogen synthase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACT09058.1 | 0 | 1 | 1009 | 1 | 999 | starch synthase IV precursor [Solanum lycopersicum] |
| EMBL | CAA16796.1 | 0 | 1 | 1008 | 1 | 1067 | starch synthase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_193558.3 | 0 | 1 | 1008 | 1 | 1036 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 1011 | 1 | 1011 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 114 | 1009 | 4 | 885 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 0 | 514 | 1000 | 1 | 475 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 2r4u_A | 0 | 514 | 1000 | 1 | 475 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 2r4t_A | 0 | 514 | 1000 | 1 | 475 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
| PDB | 2qzs_A | 0 | 514 | 1000 | 1 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3d1j_A | 0 | 514 | 1000 | 1 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| GO851132 | 333 | 589 | 921 | 0 |
| CF828776 | 286 | 639 | 924 | 0 |
| EV240569 | 262 | 1 | 262 | 0 |
| GW865616 | 298 | 620 | 917 | 0 |
| EV240569 | 28 | 264 | 291 | 0.0001 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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