| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01022339001 |
| Family | GH35 |
| Protein Properties | Length: 848 Molecular Weight: 94936.2 Isoelectric Point: 7.4306 |
| Chromosome | Chromosome/Scaffold: 7 Start: 18628550 End: 18651547 |
| Description | beta-galactosidase 10 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 30 | 333 | 0 |
| LIIDGQRKLLISASIHYPRSVPGMWPGLVKTAKEGGIDVIETYVFWNGHELSPDNYYFGGRYDLLKFVKIVQQARMYLILRVGPFVAAEWNFGGVPVWLH YVPGTVFRTNSEPFKYHMQKFMTLIVNIMKKEKLFASQGGPIILAQVENEYGDTERIYGDGGKPYAMWAANMALSQNIGVPWIMCQQYDAPDPVINTCNS FYCDQFTPNSPNKPKMWTENWPGWFKTFGAPDPHRPHEDIAFSVARFFQKGGSLQNYYMYHGGTNFGRTSGGPFITTSYDYNAPIDEYGLARLPKWGHLK ELHR | |||
| Full Sequence |
|---|
| Protein Sequence Length: 848 Download |
| MPHLKLFFLL LSIFFTSSLA ANVTYDRRSL IIDGQRKLLI SASIHYPRSV PGMWPGLVKT 60 AKEGGIDVIE TYVFWNGHEL SPDNYYFGGR YDLLKFVKIV QQARMYLILR VGPFVAAEWN 120 FGGVPVWLHY VPGTVFRTNS EPFKYHMQKF MTLIVNIMKK EKLFASQGGP IILAQVENEY 180 GDTERIYGDG GKPYAMWAAN MALSQNIGVP WIMCQQYDAP DPVINTCNSF YCDQFTPNSP 240 NKPKMWTENW PGWFKTFGAP DPHRPHEDIA FSVARFFQKG GSLQNYYMYH GGTNFGRTSG 300 GPFITTSYDY NAPIDEYGLA RLPKWGHLKE LHRAIKSCEH VLLYGEPINL SLGPSQEVDV 360 YTDSSGGCAA FISNVDEKED KIIVFQNVSY HVPAWSVSIL PDCKNVVFNT AKVGSQTSQV 420 EMVPEELQPS LVPSNKDLKG LQWETFVEKA GIWGEADFVK NGFVDHINTT KDTTDYLWYT 480 VSLTVGESEN FLKEISQPVL LVESKGHALH AFVNQKLQGS ASGNGSHSPF KFECPISLKA 540 GKNDIALLSM TVGLQNAGPF YEWVGAGLTS VKIKGLNNGI MDLSTYTWTY KIGLQGEHLL 600 IYKPEGLNSV KWLSTPEPPK QQPLTWYKAV VDPPSGNEPI GLDMVHMGKG LAWLNGEEIG 660 RYWPRKSSIH DKCVQECDYR GKFMPNKCST GCGEPTQRWY HVPRSWFKPS GNILVIFEEK 720 GGDPTKIRFS RRKTTGVCAL VSEDHPTYEL ESWHKDANEN NKNKATIHLK CPENTHISSV 780 KFASYGTPTG KCGSYSQGDC HDPNSASVVE KLCIRKNDCA IELAEKNFSK DLCPSTTKKL 840 AVEAVCS* 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1874 | LacA | 4.0e-17 | 23 | 325 | 351 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam02140 | Gal_Lectin | 2.0e-19 | 769 | 846 | 82 | + Galactose binding lectin domain. | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-152 | 29 | 335 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 21 | 847 | 830 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAF70823.1 | 0 | 3 | 847 | 10 | 870 | AF154422_1 beta-galactosidase [Solanum lycopersicum] |
| DDBJ | BAD91080.1 | 0 | 22 | 847 | 28 | 851 | beta-D-galactosidase [Pyrus pyrifolia] |
| EMBL | CBI21600.1 | 0 | 1 | 847 | 1 | 847 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002310540.1 | 0 | 4 | 847 | 3 | 827 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002522927.1 | 0 | 16 | 847 | 22 | 803 | beta-galactosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 1e-38 | 27 | 331 | 12 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 2e-32 | 23 | 318 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 2e-32 | 23 | 318 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 2e-32 | 23 | 318 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
