| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01023135001 |
| Family | CE8 |
| Protein Properties | Length: 528 Molecular Weight: 57361.2 Isoelectric Point: 6.5144 |
| Chromosome | Chromosome/Scaffold: 12 Start: 22226001 End: 22228636 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 214 | 509 | 0 |
| DVTVAADGTGNYTTVMDAVQAAPDYSQNHYVIYIKQGIYRENVEIKKKKWNLMMVGDGMGATVITGNRSYIDGWTTYASATFAVKGKGFIARDMTFENTA GPEKHQAVALRSDSDLSVYYRCSMRGYQDTLYPHTNRQFYRECRISGTVDFIFGDATVVFQNCQILVKKGLPNQKNTITAQGRKDPAQPTGFSIQFSNIS ADSDLLASVNSTLSYLGRPWKQYSRTIIMKSYISDAIRPEGWLEWNGDFALDTLYYGEYMNYGPSAGLGSRVQWPGFHLLNNSAQAANFTVTEFIA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 528 Download |
| MIDDSNSSYG RDEVNARYAS PDSSTFASSS DEEANLKLLQ SQCLAVPSSA FISSLKSTID 60 VLRGTMSVVS QFTKVFNDFR LSNAISDCLE LLDFAADDLS WSLSAIQNPK GKDNGTGDLG 120 SDLKTWLSST FTNQDTCIEG FVGTNGIVKT VVAESLSQVA SLVHSLLTMV HDPAPKGKSN 180 GGGGGVKHVG SGDFPSWVGK HSRKLLQASS VSPDVTVAAD GTGNYTTVMD AVQAAPDYSQ 240 NHYVIYIKQG IYRENVEIKK KKWNLMMVGD GMGATVITGN RSYIDGWTTY ASATFAVKGK 300 GFIARDMTFE NTAGPEKHQA VALRSDSDLS VYYRCSMRGY QDTLYPHTNR QFYRECRISG 360 TVDFIFGDAT VVFQNCQILV KKGLPNQKNT ITAQGRKDPA QPTGFSIQFS NISADSDLLA 420 SVNSTLSYLG RPWKQYSRTI IMKSYISDAI RPEGWLEWNG DFALDTLYYG EYMNYGPSAG 480 LGSRVQWPGF HLLNNSAQAA NFTVTEFIAG NLWLPSTGVK YSAGLAV* 540 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 9.0e-176 | 54 | 527 | 482 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 4.0e-176 | 55 | 525 | 473 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02201 | PLN02201 | 0 | 35 | 527 | 496 | + probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 0 | 214 | 511 | 298 | + Pectinesterase. | ||
| PLN02506 | PLN02506 | 0 | 47 | 526 | 482 | + putative pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABK92470.1 | 0 | 39 | 527 | 40 | 528 | unknown [Populus trichocarpa] |
| EMBL | CAN60612.1 | 0 | 18 | 490 | 22 | 494 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI29628.1 | 0 | 1 | 527 | 1 | 527 | unnamed protein product [Vitis vinifera] |
| Swiss-Prot | Q43062 | 0 | 39 | 527 | 44 | 522 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
| RefSeq | XP_002270616.1 | 0 | 18 | 527 | 22 | 531 | PREDICTED: pectin methylesterase PME1 [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 214 | 525 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 207 | 525 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 1e-21 | 225 | 516 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 1e-21 | 225 | 516 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-21 | 225 | 516 | 18 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| FQ453335 | 259 | 248 | 506 | 0 |
| EE092727 | 255 | 209 | 463 | 0 |
| EE096470 | 257 | 242 | 498 | 0 |
| EE070092 | 251 | 221 | 471 | 0 |
| EE094801 | 253 | 248 | 500 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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