| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01023217001 |
| Family | GH116 |
| Protein Properties | Length: 950 Molecular Weight: 106342 Isoelectric Point: 5.7195 |
| Chromosome | Chromosome/Scaffold: 12 Start: 21001414 End: 21018344 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH116 | 527 | 888 | 0 |
| GQFLYLEGVEYFMWNTNDVHFYSSFALIMLFPKLELSIQRDFAASVMMHDPSKMKLLCNGKWVSRKVLGAVPHDVGNYDPWFEVNGYNLYNTDRWKDLNP KFVLQVYRDVVATGDKNFAKAVWPSVYVALAYMNQFDKDGDGMIENEGFPDQTYDTWSVSGVSAYSGGLWVAALQAASALARVVGDKGSEDYFWFKFQKA KGVYQKLWNGSYFNYDDSDGSSSSSIQADQLAGQWYARACGLSPIVDEDKAKSALEKVYHYNVLKVGGGKRGAVNGMLPDGKVDTTTMQSREIWSGVTYG VAATMIHEGLVDMAFQTASGVYEAAWSQEGLGYSFQTPESWNTDDQYRSLCYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 950 Download |
| MCENGLEEGE REPSNSSIEE IKVDPGKPGS LTWQRKLNSD GNAPVEFKIN LRETFHLAPI 60 GFRLWRHVRE ETAKGRGAMI DPFVKRYISS SQGVPLGGIG AGSIGRSYKG EFQRFQLFPI 120 TSENEPVLEN QFSVFVSRPN GEKYSTVLCR QSPEALKECP PSGIGSWDWN LNGNKSTYLA 180 LYPRAWTVYD GEPDPALKIV CRQISPIIPH NYKESSFPVA VFTFTLFNSG KTAADITLLF 240 TWANSVGGVS GLSGQHLNSK FMMKDGVRGV LLHHKTANGR PPVTYAIAAQ EMDGVHISEC 300 PCFFISGDTP GITAKDMWNE IKEHGSFDRL NSAETSMPSE LGSSVGAAVA ASLTIPSDSE 360 QTVTFSLAWD CPEINFSKER TYYRRYTKFY GTRGDAAAKI AHDAILDHGH WESQIEAWQK 420 PVLEDKRFPE WYPITLFNEL YYLNSGGTVW TDGSPPVHSF TSIIERKFSL DRSRSDLKNT 480 VSISHHNDTA VDILERMTSV LEQVHTPVTS NSAFGPNLLQ QGEENIGQFL YLEGVEYFMW 540 NTNDVHFYSS FALIMLFPKL ELSIQRDFAA SVMMHDPSKM KLLCNGKWVS RKVLGAVPHD 600 VGNYDPWFEV NGYNLYNTDR WKDLNPKFVL QVYRDVVATG DKNFAKAVWP SVYVALAYMN 660 QFDKDGDGMI ENEGFPDQTY DTWSVSGVSA YSGGLWVAAL QAASALARVV GDKGSEDYFW 720 FKFQKAKGVY QKLWNGSYFN YDDSDGSSSS SIQADQLAGQ WYARACGLSP IVDEDKAKSA 780 LEKVYHYNVL KVGGGKRGAV NGMLPDGKVD TTTMQSREIW SGVTYGVAAT MIHEGLVDMA 840 FQTASGVYEA AWSQEGLGYS FQTPESWNTD DQYRSLCYMR PLAIWAMQWA FSQPKLHKYE 900 ANPEMNEDSL VLQHAGFSRV ARLLKLPDED VSRSALQVIY DYTCKRMWL* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4354 | COG4354 | 9.0e-28 | 93 | 452 | 381 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 8.0e-63 | 93 | 411 | 327 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 5.0e-65 | 526 | 887 | 381 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 1.0e-158 | 527 | 889 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_199801.2 | 0 | 12 | 947 | 14 | 955 | catalytic/ glucosylceramidase [Arabidopsis thaliana] |
| RefSeq | XP_002264575.1 | 0 | 1 | 949 | 1 | 949 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002328722.1 | 0 | 22 | 947 | 1 | 922 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331126.1 | 0 | 4 | 947 | 9 | 945 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528846.1 | 0 | 4 | 947 | 9 | 949 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JG703027 | 328 | 545 | 872 | 0 |
| DY292040 | 359 | 540 | 895 | 0 |
| DY669443 | 289 | 353 | 641 | 0 |
| FC895322 | 295 | 400 | 694 | 0 |
| DY302175 | 322 | 366 | 687 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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