| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01023786001 |
| Family | CE8 |
| Protein Properties | Length: 366 Molecular Weight: 40361.8 Isoelectric Point: 8.0226 |
| Chromosome | Chromosome/Scaffold: 3 Start: 3477198 End: 3481070 |
| Description | pectinesterase 11 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 65 | 337 | 0 |
| RVDQSGNGDYGKIQDAIDAVPSNNSQLYFILVKPGTYREKIVVPADKPFITLSGTQASTTIITWGDGGEIFESPTLSILASDFVGRYLTIQNTFGTSSKA VAVRVSGDRAAFYNCRILSYQDTLLDDAGRHYYRNCYIEGATDFICGSAASLFEKCHLHSLSEGNGAITAQQRGSTSENNGFTFLGCKITGVGTPYLGRP WGPYSRVVFVLSFMSSVVQPQGWDDWGDSNKQSTVYYGEYKCYGPGANRTERVEWSRSLSSDEAVPFLTKEMI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 366 Download |
| MYKIFINFYY NRKFRLLHMG FAVAAMKMVH RGYIVVLLVE LLVFCSFMAS SATSSNDMST 60 AILIRVDQSG NGDYGKIQDA IDAVPSNNSQ LYFILVKPGT YREKIVVPAD KPFITLSGTQ 120 ASTTIITWGD GGEIFESPTL SILASDFVGR YLTIQNTFGT SSKAVAVRVS GDRAAFYNCR 180 ILSYQDTLLD DAGRHYYRNC YIEGATDFIC GSAASLFEKC HLHSLSEGNG AITAQQRGST 240 SENNGFTFLG CKITGVGTPY LGRPWGPYSR VVFVLSFMSS VVQPQGWDDW GDSNKQSTVY 300 YGEYKCYGPG ANRTERVEWS RSLSSDEAVP FLTKEMIGGQ GWLRPAPTYF MRGSSVITMN 360 TDGKN* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02497 | PLN02497 | 5.0e-88 | 30 | 347 | 331 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 1.0e-88 | 53 | 344 | 309 | + pectinesterase | ||
| PLN02665 | PLN02665 | 1.0e-90 | 63 | 349 | 298 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 1.0e-106 | 64 | 345 | 299 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 0 | 52 | 344 | 293 | + putative pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN79458.1 | 0 | 19 | 357 | 1 | 339 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI37658.1 | 0 | 1 | 365 | 1 | 365 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002280496.1 | 0 | 58 | 365 | 1 | 308 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002281308.1 | 0 | 23 | 363 | 25 | 363 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002305435.1 | 0 | 38 | 350 | 1 | 314 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 64 | 344 | 9 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 66 | 353 | 7 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-18 | 74 | 338 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-18 | 74 | 338 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-18 | 74 | 338 | 18 | 335 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
