| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01024031001 |
| Family | GH35 |
| Protein Properties | Length: 834 Molecular Weight: 93522.2 Isoelectric Point: 8.8101 |
| Chromosome | Chromosome/Scaffold: 3 Start: 1640991 End: 1645417 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 39 | 343 | 0 |
| LIVNGRRELLFSGSIHYPRSTPEMWPDILQKAKHGGLNLIQTYVFWNIHEPVEGQFNFEGNYDLVKFIKLIGDYGLYATLRIGPFIEAEWNHGGFPYWLR EVPDIIFRSYNEPFKYHMEKYSRMIIEMMKEAKLFAPQGGPIILAQIENEYNSIQLAYRELGVQYVQWAGKMAVGLGAGVPWIMCKQKDAPDPVINTCNG RHCGDTFTGPNRPNKPSLWTENWTAQYRVFGDPPSQRAAEDLAFSVARFISKNGTLANYYMYHGGTNFGRTGSSFVTTRYYDEAPLDEYGLQREPKWGHL KDLHS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 834 Download |
| MVVSGQALIA AVLSLLVSYA AAHGIAKGAK TVTYDGRSLI VNGRRELLFS GSIHYPRSTP 60 EMWPDILQKA KHGGLNLIQT YVFWNIHEPV EGQFNFEGNY DLVKFIKLIG DYGLYATLRI 120 GPFIEAEWNH GGFPYWLREV PDIIFRSYNE PFKYHMEKYS RMIIEMMKEA KLFAPQGGPI 180 ILAQIENEYN SIQLAYRELG VQYVQWAGKM AVGLGAGVPW IMCKQKDAPD PVINTCNGRH 240 CGDTFTGPNR PNKPSLWTEN WTAQYRVFGD PPSQRAAEDL AFSVARFISK NGTLANYYMY 300 HGGTNFGRTG SSFVTTRYYD EAPLDEYGLQ REPKWGHLKD LHSALRLCKK ALFTGSPGVE 360 KLGKDKEVRF YEKPGTHICA AFLTNNHSRE AATLTFRGEE YFLPPHSISI LPDCKTVVYN 420 TQRVVAQHNA RNFVKSKIAN KNLKWEMSQE PIPVMTDMKI LTKSPMELYN FLKDRSDYAW 480 FVTSIELSNY DLPMKKDIIP VLQISNLGHA MLAFVNGNFI GSAHGSNVEK NFVFRKPVKF 540 KAGTNYIALL CMTVGLPNSG AYMEHRYAGI HSVQILGLNT GTLDITNNGW GQQVGVNGEH 600 VKAYTQGGSH RVQWTAAKGK GPAMTWYKTY FDMPEGNDPV ILRMTSMAKG MAWVNGKNIG 660 RYWLSYLSPL EKPSQSEYHV PRAWLKPSDN LLVIFEETGG NPEEIEVELV NRDTICSIVT 720 EYHPPHVKSW QRHDSKIRAV VDEVKPKGHL KCPNYKVIVK VDFASFGNPL GACGDFEMGN 780 CTAPNSKKVV EQHCMGKTTC EIPMEAGIFD GNSGACSDIT KTLAVQVRCG RKV* 840 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 4.0e-9 | 54 | 189 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 4.0e-17 | 750 | 829 | 83 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 3.0e-19 | 32 | 189 | 168 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 7.0e-154 | 38 | 345 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 25 | 829 | 830 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACC60982.1 | 0 | 24 | 832 | 20 | 829 | beta-galactosidase 2 precursor [Petunia x hybrida] |
| EMBL | CAN73625.1 | 0 | 1 | 833 | 1 | 767 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002278545.1 | 0 | 1 | 833 | 1 | 833 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306183.1 | 0 | 22 | 832 | 23 | 829 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002312963.1 | 0 | 8 | 832 | 9 | 828 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 2e-38 | 38 | 341 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.000002 | 625 | 706 | 509 | 582 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-35 | 32 | 328 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 0.00001 | 528 | 724 | 432 | 630 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-35 | 32 | 328 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
