| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01024634001 |
| Family | AA1 |
| Protein Properties | Length: 1562 Molecular Weight: 175768 Isoelectric Point: 7.0698 |
| Chromosome | Chromosome/Scaffold: 6 Start: 8172873 End: 8203228 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 1019 | 1547 | 0 |
| AETHYHDFVVQQTPVKRLCRTHNIITVNGQFPGPTLEVRDGDTLVIKVVNSARYNVTLHWHGIRQMRTPWADGPEYVTQCPIRPGATYTYRFTIENQEGT LWWHAHSKWLRATVYGALVIYPKLGSSYPFPQPNHEAPILLGEWWDRDPIAVLRQATFTGAAPNISDAYTINGQPGDLYRCSSKETARLPLDSGERILLR IINSALNQQLFFSVANHKLTVVGADAAYTKPFTTTVMMLGPGQTTDVLLTADQPPARYYMAARAYDSAQNAPFDNTTTTAILEYKGACYTKKGQSSKPVF PRLPAYNDTPTVTAFTSRFKSLTTSKVPTKIDESLFFTIGFGLFNCRPGPRCQGPNGTRFGASMNNVSFVLPSSNSILQASYQGIPGVFTTDFPASPPLQ FDYTGNVSRALWQPVRGTKVYKLKYGSTVQIVLQDTSIFSIENHPMHLHGYHFYVVALGFGNFNPVTDTAKFNLIDPPVRNTIGVPTGGWAVIRFVADNP GTWLMHCHIDAHLTWGLAMVFLVENGAGE | |||
| Full Sequence |
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| Protein Sequence Length: 1562 Download |
| MASKFGMAGG IPERRVRPIW DAIDSRQFKN ALKLSASLLS KYPNSPYALA LKALILERMG 60 KSDEALSVCL SAKELLYTND SVLMDELTLS TLQIVFQRLD HLDLATSCYE YACGKFLNNL 120 EIMMGLFNCY VREYSFVKQQ QTAIKMYKIV GEERFLLWAV CSIQLQVLCG NGGEKLLLLA 180 EGLLKKHIAS HSLHEPEALI VYISVLEQQA KYGDALEVLS GKLGSLLVIE VDRLRIQGRL 240 LARAGDYATA ANIYQKVLES CPDDWECFQH YLDCLLEDGS YWCNEPLNDS VHPPKDVERN 300 SSHLTDEVFI SRLSNASAFA QKLQAEAGND FIRCPYLANL EIERRKQLQG KGDDDKLIEV 360 LMQYFFRFGH LACFASDIEG FLRVLPFGKK EEFLEKLIKS CDSLSAVPTK LLGQSISLFK 420 IEELIGNMFK IPVVELENSA IRMAQMYCKN LPLSKDLDQQ ESMHGEELLS MACNVLVQLF 480 WRTRQLGYLL EAIMILELGL TIRRHVWQYK ILLVHLYSYL GAYSLSYEWY KSLEVKNILL 540 ESVSHHILPQ MLVSPLWVDL NDVLKDYLKF MDDHLKESAD LTSLAYRHRN YSKVIEFVQF 600 KERLQHSNQY LMARLEAPIL QLKLNANNIE EEECILESLK SRVHFPEFSS EIGGKSLTFN 660 EDMQSRPWWT PIPDKNYLLE PFEGVSFCPR ENLQQQRKGR EANVRTAIEK RSLVPRMIYL 720 SIQCASASLK ENIEANGSMY DPKISSELRF LLERYAKILG FPFNDAIQVV VGVLSGQKSS 780 EAFNSDTVDW LNFAVFLNAW NLGSHELGLS DEDGCRPGTW HIVNSLLERY IVEKVRSMGP 840 LISSLGCDLP TLVQLVTEPL AWHGLIIQSC VRSALPSGKR KKKSGSVDQS NSPVSNAIRD 900 SIQSLCSIVE EVTKWLRVQI KKSEDENVEI ILSSFHRKEQ TVGPGQVFQV LQALISSTSD 960 TELGDRISQT LKSWSHVDVA RKLVTGQRKA NNIIIKPRGC SLFLGLFLFF AFSASLADAE 1020 THYHDFVVQQ TPVKRLCRTH NIITVNGQFP GPTLEVRDGD TLVIKVVNSA RYNVTLHWHG 1080 IRQMRTPWAD GPEYVTQCPI RPGATYTYRF TIENQEGTLW WHAHSKWLRA TVYGALVIYP 1140 KLGSSYPFPQ PNHEAPILLG EWWDRDPIAV LRQATFTGAA PNISDAYTIN GQPGDLYRCS 1200 SKETARLPLD SGERILLRII NSALNQQLFF SVANHKLTVV GADAAYTKPF TTTVMMLGPG 1260 QTTDVLLTAD QPPARYYMAA RAYDSAQNAP FDNTTTTAIL EYKGACYTKK GQSSKPVFPR 1320 LPAYNDTPTV TAFTSRFKSL TTSKVPTKID ESLFFTIGFG LFNCRPGPRC QGPNGTRFGA 1380 SMNNVSFVLP SSNSILQASY QGIPGVFTTD FPASPPLQFD YTGNVSRALW QPVRGTKVYK 1440 LKYGSTVQIV LQDTSIFSIE NHPMHLHGYH FYVVALGFGN FNPVTDTAKF NLIDPPVRNT 1500 IGVPTGGWAV IRFVADNPGT WLMHCHIDAH LTWGLAMVFL VENGAGELQS IEPPPADLPP 1560 C* 1620 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam09797 | NatB_MDM20 | 6.0e-62 | 315 | 663 | 349 | + N-acetyltransferase B complex (NatB) non catalytic subunit. This is the non-catalytic subunit of the N-terminal acetyltransferase B complex (NatB). The NatB complex catalyzes the acetylation of the amino-terminal methionine residue of all proteins beginning with Met-Asp or Met-Glu and of some proteins beginning with Met-Asn or Met-Met. In Saccharomyces cerevisiae this subunit is called MDM20 and in Schizosaccharomyces pombe it is called Arm1. NatB acetylates the Tpm1 protein and regulates and tropomyocin-actin interactions. This subunit is required by the NatB complex for the N-terminal acetylation of Tpm1. | ||
| PLN02191 | PLN02191 | 3.0e-73 | 1037 | 1539 | 531 | + L-ascorbate oxidase | ||
| PLN02604 | PLN02604 | 2.0e-76 | 1037 | 1550 | 552 | + oxidoreductase | ||
| TIGR03388 | ascorbase | 3.0e-94 | 1037 | 1539 | 531 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 1019 | 1561 | 547 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0005515 | protein binding |
| GO:0016491 | oxidoreductase activity |
| GO:0042802 | identical protein binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAO41896.1 | 0 | 1 | 990 | 45 | 1021 | unknown protein [Arabidopsis thaliana] |
| EMBL | CBI15873.1 | 0 | 1 | 1561 | 1 | 1561 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273069.1 | 0 | 1 | 990 | 1 | 987 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319956.1 | 0 | 1 | 986 | 1 | 1012 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516347.1 | 0 | 1 | 986 | 1 | 985 | TPR repeat-containing protein R13F6.10, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 1037 | 1539 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1asq_A | 0 | 1037 | 1539 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1asp_B | 0 | 1037 | 1539 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1asp_A | 0 | 1037 | 1539 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| PDB | 1aso_B | 0 | 1037 | 1539 | 19 | 521 | A Chain A, Raphanus Sativus Anionic Peroxidase. |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO797675 | 504 | 1065 | 1562 | 0 |
| DY297248 | 325 | 1204 | 1524 | 0 |
| EX658195 | 280 | 1018 | 1297 | 0 |
| BX839990 | 288 | 1018 | 1305 | 0 |
| DY263574 | 351 | 1018 | 1366 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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