| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01024793001 |
| Family | GH3 |
| Protein Properties | Length: 587 Molecular Weight: 64112 Isoelectric Point: 5.7444 |
| Chromosome | Chromosome/Scaffold: 6 Start: 6901466 End: 6907000 |
| Description | Glycosyl hydrolase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 60 | 297 | 0 |
| LESRLGIPLLYGIDAVHGNNSIYGATIFPHNVGLGATRDADLAQRIGVATALEVRASGIHYTFAPCVAVCRDPRWGRCYESYSSDTNIVRKMTSVITGLQ GKPPPGHPKGYPFVAGRHNVVACAKHFVGDGGTDKGENEGNTILSYEDLERIHMTPYPDCISQGVATVMASYSSWNGTQLHAHRFLLSDVLKDKMGFKGF LISDWEGLDRLSKPNPHGSNYRTSICTAVNTGIDMVMV | |||
| Full Sequence |
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| Protein Sequence Length: 587 Download |
| MTLKEKAGQM TQIERRVATP SVLKDLSIGS ILSAGGSGPF DKALSADWAD MVDGFQQSAL 60 ESRLGIPLLY GIDAVHGNNS IYGATIFPHN VGLGATRDAD LAQRIGVATA LEVRASGIHY 120 TFAPCVAVCR DPRWGRCYES YSSDTNIVRK MTSVITGLQG KPPPGHPKGY PFVAGRHNVV 180 ACAKHFVGDG GTDKGENEGN TILSYEDLER IHMTPYPDCI SQGVATVMAS YSSWNGTQLH 240 AHRFLLSDVL KDKMGFKGFL ISDWEGLDRL SKPNPHGSNY RTSICTAVNT GIDMVMVPFR 300 YAKFLEDLID LVESGEIPMT RIDDAVERIL RVKLVAGLFE YPYSDRSLLD TVGCKLHRDL 360 AREAVRKSLV LLKNGKDQKK PFLPLDRKAK RVLVAGSHAD DLGYQCGGWT ATWHGASGRI 420 TIGTTVLDAI REAVGDKTEV IYEQNPSPAT FEGQDFSYAI VVVGEDPYAE HTGDNSELII 480 PFNANDVISL VADRIPTLVI LISGRPLVLE PWILEKMDAL IAAWLPGSEG GGITDVVFGD 540 YDFEGRLPVT WFKSVEQLPM HPEDNSYDPL FPFGFGLTYN KKGPLN* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03080 | PLN03080 | 4.0e-38 | 63 | 581 | 584 | + Probable beta-xylosidase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 3.0e-56 | 369 | 579 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 3.0e-81 | 2 | 332 | 337 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| COG1472 | BglX | 7.0e-86 | 1 | 434 | 441 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| PRK15098 | PRK15098 | 2.0e-92 | 1 | 579 | 643 | + beta-D-glucoside glucohydrolase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN81230.1 | 0 | 1 | 586 | 23 | 639 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI16000.1 | 0 | 1 | 586 | 1 | 586 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002279757.1 | 0 | 1 | 586 | 135 | 720 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002313393.1 | 0 | 1 | 578 | 26 | 595 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525596.1 | 0 | 1 | 581 | 24 | 602 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1x39_A | 0 | 1 | 580 | 23 | 600 | A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) |
| PDB | 1x38_A | 0 | 1 | 580 | 23 | 600 | A Chain A, Crystal Structure Of Corynebacterium Glutamicum Pimb' Bound To Gdp (Orthorhombic Crystal Form) |
| PDB | 1lq2_A | 0 | 1 | 580 | 23 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1j8v_A | 0 | 1 | 580 | 23 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| PDB | 1iex_A | 0 | 1 | 580 | 23 | 600 | A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
| linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
| linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
| lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
| neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
| taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EV240131 | 316 | 190 | 500 | 0 |
| DY265467 | 356 | 109 | 461 | 0 |
| HO784016 | 420 | 39 | 457 | 0 |
| EL455042 | 312 | 39 | 350 | 0 |
| HO784016 | 24 | 1 | 24 | 0.62 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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