| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01025847001 |
| Family | GH51 |
| Protein Properties | Length: 630 Molecular Weight: 69651.9 Isoelectric Point: 5.253 |
| Chromosome | Chromosome/Scaffold: 8 Start: 11257296 End: 11264525 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH51 | 151 | 611 | 0 |
| NWTKYTANLRATATNSNARLQLTTTKKGVIWFDQVSLMPVDTYRNHNFRKDLSQMIADLKPRFLRFPGGCFVEGDWLRNAFRWKQTIGPWEERPGHFGDV WKYWTDDGLGYFEFLQLAEDIGALPVWVFNNGISHNDEVDTTSIGPFVQEVLDSIEFARGASNSTWGSVRTAMGHEDPFNLKYIAVGNEDCWKKNYRGNY MRFYDAIKRVYPDIKLITNCDASSRKLNHPADYYDFHIYTSATNLYSMAHQFDRTSRDAPKAFVSEYAVTGKDAGSGTLLAALAEAAFLIGVEKNSDVVE MASYAPLFVNSNDRTWSPDAIVFNSSFVYGTPSYWMQHFFSNSSGATLLNSTLTNNSSSSLIASAITWKSSQDNKTYIKLKVVNFRNVSVSLKISVDGLQ TNSLQLSGATKTVLTSSNVMDENSFKEPTKVAPFRFELKDVGKDLDAELPAYSFTAFDLLT | |||
| Full Sequence |
|---|
| Protein Sequence Length: 630 Download |
| MPETLFGLFF EEINHAGAGG LWAELVSNRG FEAGGPITPS NIDPWAVIGN ESYVVVATDR 60 SSPFERNKVA LRVEVLCGND SNSTNICPAG GVGVYNPGYW GMNVEQNKWF TVVMHVRSEG 120 AVNISVALTS SNGVDTLAAT NFVANACTVG NWTKYTANLR ATATNSNARL QLTTTKKGVI 180 WFDQVSLMPV DTYRNHNFRK DLSQMIADLK PRFLRFPGGC FVEGDWLRNA FRWKQTIGPW 240 EERPGHFGDV WKYWTDDGLG YFEFLQLAED IGALPVWVFN NGISHNDEVD TTSIGPFVQE 300 VLDSIEFARG ASNSTWGSVR TAMGHEDPFN LKYIAVGNED CWKKNYRGNY MRFYDAIKRV 360 YPDIKLITNC DASSRKLNHP ADYYDFHIYT SATNLYSMAH QFDRTSRDAP KAFVSEYAVT 420 GKDAGSGTLL AALAEAAFLI GVEKNSDVVE MASYAPLFVN SNDRTWSPDA IVFNSSFVYG 480 TPSYWMQHFF SNSSGATLLN STLTNNSSSS LIASAITWKS SQDNKTYIKL KVVNFRNVSV 540 SLKISVDGLQ TNSLQLSGAT KTVLTSSNVM DENSFKEPTK VAPFRFELKD VGKDLDAELP 600 AYSFTAFDLL TDSSSLQTVE TDAGYKSSI* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02018 | CBM_4_9 | 0.001 | 23 | 174 | 155 | + Carbohydrate binding domain. This family includes diverse carbohydrate binding domains. | ||
| pfam06964 | Alpha-L-AF_C | 2.0e-23 | 415 | 603 | 202 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 1.0e-30 | 198 | 394 | 219 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 9.0e-31 | 415 | 603 | 199 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABV08815.1 | 0 | 4 | 618 | 41 | 653 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
| GenBank | ABV08816.1 | 0 | 4 | 618 | 43 | 655 | alpha-L-arabinofuranosidase [Fragaria x ananassa] |
| EMBL | CBI32865.1 | 0 | 1 | 629 | 1 | 629 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283975.1 | 0 | 1 | 629 | 48 | 676 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002523672.1 | 0 | 1 | 629 | 52 | 678 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 9e-18 | 198 | 581 | 49 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 9e-18 | 198 | 581 | 49 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 9e-18 | 198 | 581 | 49 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 9e-18 | 198 | 581 | 49 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 9e-18 | 198 | 581 | 49 | 454 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO852683 | 414 | 198 | 609 | 0 |
| FC062796 | 250 | 212 | 461 | 0 |
| HO780740 | 393 | 225 | 617 | 0 |
| JG577027 | 338 | 49 | 386 | 0 |
| FC062474 | 233 | 104 | 336 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
