| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01026258001 |
| Family | GT65 |
| Protein Properties | Length: 250 Molecular Weight: 28340.6 Isoelectric Point: 8.9667 |
| Chromosome | Chromosome/Scaffold: 10 Start: 15025969 End: 15030834 |
| Description | O-fucosyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT65 | 1 | 156 | 4e-32 |
| MMKRTLLMPSLSASLFYKEIDLLQPISFDKVFQFERFNSLCNGFVRLGRYSDLSNRTQVFELQKGSGRKWTIERDLDQLREFSKEPYDGYEVIRILGKNP FLWHDHWPVKDYAKVFDCLVLVEEISKEADKVVSKIREMGRKVGSKAISSTTLVGG | |||
| Full Sequence |
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| Protein Sequence Length: 250 Download |
| MMKRTLLMPS LSASLFYKEI DLLQPISFDK VFQFERFNSL CNGFVRLGRY SDLSNRTQVF 60 ELQKGSGRKW TIERDLDQLR EFSKEPYDGY EVIRILGKNP FLWHDHWPVK DYAKVFDCLV 120 LVEEISKEAD KVVSKIREMG RKVGSKAISS TTLVGGTPFL RPLLLATRES WTEGGEKKKI 180 LEQGEGNQKM KEVTLADQTT YDAKVVGFDQ DKDVAVLRVD APNEKLRPIP PVVSADLLVG 240 QKVYASGSQ* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13365 | Trypsin_2 | 6.0e-6 | 192 | 247 | 56 | + Trypsin-like peptidase domain. This family includes trypsin like peptidase domains. | ||
| TIGR02037 | degP_htrA_DO | 1.0e-8 | 192 | 248 | 57 | + periplasmic serine protease, Do/DeqQ family. This family consists of a set proteins various designated DegP, heat shock protein HtrA, and protease DO. The ortholog in Pseudomonas aeruginosa is designated MucD and is found in an operon that controls mucoid phenotype. This family also includes the DegQ (HhoA) paralog in E. coli which can rescue a DegP mutant, but not the smaller DegS paralog, which cannot. Members of this family are located in the periplasm and have separable functions as both protease and chaperone. Members have a trypsin domain and two copies of a PDZ domain. This protein protects bacteria from thermal and other stresses and may be important for the survival of bacterial pathogens.// The chaperone function is dominant at low temperatures, whereas the proteolytic activity is turned on at elevated temperatures [Protein fate, Protein folding and stabilization, Protein fate, Degradation of proteins, peptides, and glycopeptides]. | ||
| COG0265 | DegQ | 5.0e-9 | 192 | 248 | 57 | + Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones] | ||
| pfam10250 | O-FucT | 6.0e-15 | 1 | 142 | 152 | + GDP-fucose protein O-fucosyltransferase. This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present in O-FucT-1 as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and C. elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI29064.1 | 0 | 1 | 249 | 1 | 249 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273827.1 | 0 | 1 | 150 | 81 | 230 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002321799.1 | 0 | 1 | 150 | 1 | 150 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002332132.1 | 0 | 1 | 163 | 1 | 164 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531235.1 | 0 | 1 | 146 | 100 | 245 | conserved hypothetical protein [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3qo6_C | 4e-22 | 193 | 248 | 81 | 136 | A Chain A, Crystal Structure Analysis Of The Plant Protease Deg1 |
| PDB | 3qo6_B | 4e-22 | 193 | 248 | 81 | 136 | A Chain A, Crystal Structure Analysis Of The Plant Protease Deg1 |
| PDB | 3qo6_A | 4e-22 | 193 | 248 | 81 | 136 | A Chain A, Crystal Structure Analysis Of The Plant Protease Deg1 |
| PDB | 4ic6_C | 0.0001 | 198 | 248 | 111 | 161 | A Chain A, Crystal Structure Of Deg8 |
| PDB | 4ic6_B | 0.0001 | 198 | 248 | 111 | 161 | A Chain A, Crystal Structure Of Deg8 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| BQ967403 | 152 | 1 | 152 | 0 |
| GW440396 | 147 | 1 | 147 | 0 |
| FK000039 | 162 | 2 | 163 | 0 |
| BM411507 | 160 | 1 | 160 | 0 |
| DT756427 | 140 | 1 | 140 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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