| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01026518001 |
| Family | CE8 |
| Protein Properties | Length: 407 Molecular Weight: 44834.2 Isoelectric Point: 5.7856 |
| Chromosome | Chromosome/Scaffold: 4 Start: 22313152 End: 22315063 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 87 | 389 | 0 |
| ATVCKGGDGCYKTVQEAVNAAPDNDSSRKFVIRIQEGVYEETVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGISTYNSATVGVAGDGFMASGLTMENT AGPDEHQAVAFRSDSDLSVIENCEFISNQDTLYVYSLRQFYKSCRIQGNVDFIFGNSASIFHDCLILVSPRPLDPEKGETNAVTAHGRTDPAQTTGLVFQ NCVVNGTEEYMKLYHSNPTVHKNFLGRPWKEYSRTVFIHCNLEVLITPPGWMPWSGDFALATLYYGEFENRGLGANLSSRVEWSSRIPAKHVGTYSLKNF IQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 407 Download |
| MGLPHHQAPE KNPINTVNFN SVHHHFHGFS LLSHSSFSSL SFHFLRRIPN LIDGEGSATW 60 EDQGCEGLDE LRPSPPVQLL VSPQPNATVC KGGDGCYKTV QEAVNAAPDN DSSRKFVIRI 120 QEGVYEETVR VPLEKKNVVF LGDGMGKTVI TGSLNVGQPG ISTYNSATVG VAGDGFMASG 180 LTMENTAGPD EHQAVAFRSD SDLSVIENCE FISNQDTLYV YSLRQFYKSC RIQGNVDFIF 240 GNSASIFHDC LILVSPRPLD PEKGETNAVT AHGRTDPAQT TGLVFQNCVV NGTEEYMKLY 300 HSNPTVHKNF LGRPWKEYSR TVFIHCNLEV LITPPGWMPW SGDFALATLY YGEFENRGLG 360 ANLSSRVEWS SRIPAKHVGT YSLKNFIQGD EWIPHILDDE ATAINH* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02745 | PLN02745 | 3.0e-102 | 83 | 393 | 317 | + Putative pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-108 | 84 | 393 | 317 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 6.0e-110 | 88 | 394 | 315 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-153 | 86 | 390 | 308 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 85 | 396 | 312 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI37561.1 | 0 | 1 | 406 | 1 | 406 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002275192.1 | 0 | 84 | 406 | 231 | 553 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275218.1 | 0 | 84 | 394 | 260 | 570 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002281640.1 | 0 | 85 | 394 | 243 | 552 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306241.1 | 0 | 55 | 394 | 217 | 555 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 85 | 393 | 7 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 86 | 393 | 4 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 2e-19 | 86 | 364 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 2e-19 | 86 | 364 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 2e-19 | 86 | 364 | 5 | 314 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EC956172 | 265 | 130 | 394 | 0 |
| EX671576 | 278 | 119 | 396 | 0 |
| DT745154 | 277 | 118 | 394 | 0 |
| FP028428 | 265 | 84 | 348 | 0 |
| DT571356 | 268 | 89 | 354 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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