CAZyme Information

Basic Information
SpeciesVitis vinifera
Cazyme IDGSVIVT01027076001
FamilyGH18
Protein PropertiesLength: 436 Molecular Weight: 49354.5 Isoelectric Point: 9.7444
ChromosomeChromosome/Scaffold: 15 Start: 18144275 End: 18149907
DescriptionGlycosyl hydrolase superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH181074269.4e-34
  YPVLAYITPWNNKGYDLAKSFNSKFTHLSPIWYDLRSQGTNLVLEGRHNADIGWITELRMKGDAWVIPRVVLEAIPKELLRKKKQRDKAIEMIITECKEM
  DYDGIVLESWSRWAAYGILHDPVMRNMALQFIKQLGQALHSVSSEKNGKQGLQLIYVIGPPRSEKLQEHDFGPADLRSLSDYVDGFSLMTYDFSGPHNPG
  PNAPLKWIHSTLQLLLGSVGKSDQSLARKILLGINFYGNDFALSKGGGGGAITGRDYLSLLDKHKPVLQWEKNSGEHLFFYSDDHHAKHAVFYPSLMSIF
  LRLEEARSWGVGISIWEIGQ
Full Sequence
Protein Sequence     Length: 436     Download
MAKRREGRVP SSSDRREDRV EASKRAIRRG GDSASSPKIN IVLFLFVVIA PAIAVLVYRI    60
RYAPRTNRAL SSYVHQQGLV KADVNYQEIL TENSKVSKNM SQRHYTYPVL AYITPWNNKG    120
YDLAKSFNSK FTHLSPIWYD LRSQGTNLVL EGRHNADIGW ITELRMKGDA WVIPRVVLEA    180
IPKELLRKKK QRDKAIEMII TECKEMDYDG IVLESWSRWA AYGILHDPVM RNMALQFIKQ    240
LGQALHSVSS EKNGKQGLQL IYVIGPPRSE KLQEHDFGPA DLRSLSDYVD GFSLMTYDFS    300
GPHNPGPNAP LKWIHSTLQL LLGSVGKSDQ SLARKILLGI NFYGNDFALS KGGGGGAITG    360
RDYLSLLDKH KPVLQWEKNS GEHLFFYSDD HHAKHAVFYP SLMSIFLRLE EARSWGVGIS    420
IWEIGQGLDY FFDLL* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_183.0e-13184426263+
COG3858COG38584.0e-21185435257+
cd02874GH18_CFLE_spore_hydrolase9.0e-30109435346+
smart00636Glyco_184.0e-30109426360+
cd02876GH18_SI-CLP2.0e-150105435336+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAN82499.1014351516hypothetical protein [Vitis vinifera]
EMBLCBI40499.1014351435unnamed protein product [Vitis vinifera]
RefSeqNP_192013.1014351430glycosyl hydrolase family 18 protein [Arabidopsis thaliana]
RefSeqXP_002320856.106143527399predicted protein [Populus trichocarpa]
RefSeqXP_002523373.1014351432chitinase, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A07443545393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B07443545393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.000005272424163308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.000005272424163308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
Transmembrane Domains
StartEnd
3958
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY27458236113610
FC88105630613060
DY27271430853120
FC91674630453080
DY272714363123471.9
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Fragaria vescamrna19212.1-v1.0-hybrid
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny