| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01027437001 |
| Family | GT5 |
| Protein Properties | Length: 615 Molecular Weight: 67383.7 Isoelectric Point: 8.7816 |
| Chromosome | Chromosome/Scaffold: 15 Start: 16729944 End: 16734154 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 91 | 586 | 0 |
| IFVGTEVGPWSKTGGLGDVLGGLPPAMSANGHRVMTVSPRFDQYKDAWDTGVTVQLNVGDRFEKVRFFHCYKRGVDRVFVDHPWFLEKVWGKTGSKLYGP LAGEDFQDNQLRFSLLCQAALEAPRILNLKSSKYFSGPYGEDVVFIANDWHTAPLACYLKTMYRLKGRYGNAKVVFCIHNIAYQGRFAFADFSLLNLPDE FKSSFDFTDGYEKPVKGRKINWMKAGILEADKVLTVSPYYAKELVSGVEKGVELDNILRRTGITGIINGMDVQEWNPLTDKYISIKYDASTVKEAKLLLK EALQAEAGLPVDRNIPVIGFIGRLEEQKGSDILVAAIPQFVTANVQIIVLGTGKKPMEKQLEQLEKKYPDNARGVAKFNVPLAHMIIAGADFLLVPSRFE PCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGSFSVECDAVDPADATAVATSVKRALATYGTPALTEMVQNCMAQDLSWKGPAKKWEEVL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 615 Download |
| MATVTASNFL PRSSNGNCGA TCRIEKKATL TKLRPKIQIL AHNGLRALNS VDELHQRTTI 60 KVTRKGSRKG FKNENPRPWG GIICGCGMSL IFVGTEVGPW SKTGGLGDVL GGLPPAMSAN 120 GHRVMTVSPR FDQYKDAWDT GVTVQLNVGD RFEKVRFFHC YKRGVDRVFV DHPWFLEKVW 180 GKTGSKLYGP LAGEDFQDNQ LRFSLLCQAA LEAPRILNLK SSKYFSGPYG EDVVFIANDW 240 HTAPLACYLK TMYRLKGRYG NAKVVFCIHN IAYQGRFAFA DFSLLNLPDE FKSSFDFTDG 300 YEKPVKGRKI NWMKAGILEA DKVLTVSPYY AKELVSGVEK GVELDNILRR TGITGIINGM 360 DVQEWNPLTD KYISIKYDAS TVKEAKLLLK EALQAEAGLP VDRNIPVIGF IGRLEEQKGS 420 DILVAAIPQF VTANVQIIVL GTGKKPMEKQ LEQLEKKYPD NARGVAKFNV PLAHMIIAGA 480 DFLLVPSRFE PCGLIQLHAM RYGTVPIVAS TGGLVDTVKE GFTGFQMGSF SVECDAVDPA 540 DATAVATSVK RALATYGTPA LTEMVQNCMA QDLSWKGPAK KWEEVLLSLG VPGSEPGIDG 600 EEIAPLSKEN VATP* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 7.0e-78 | 88 | 589 | 515 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 9.0e-98 | 88 | 584 | 515 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 1.0e-123 | 88 | 585 | 508 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 5.0e-162 | 88 | 589 | 511 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-170 | 92 | 586 | 508 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACB30385.1 | 0 | 25 | 614 | 26 | 614 | granule bound starch synthase Ib precursor [Lotus japonicus] |
| GenBank | ACB97678.1 | 0 | 38 | 614 | 39 | 615 | granule bound starch synthase Ib precursor [Malus x domestica] |
| GenBank | ACH72975.1 | 0 | 1 | 614 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACM78591.1 | 0 | 1 | 614 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| RefSeq | XP_002273608.1 | 0 | 1 | 614 | 1 | 614 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 88 | 614 | 10 | 536 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 3vue_A | 0 | 88 | 614 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 88 | 589 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 88 | 589 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 88 | 589 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch biosynthesis | GLYCOGENSYN-RXN | EC-2.4.1.21 | starch synthase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| AJ568414 | 615 | 1 | 615 | 0 |
| HO825853 | 518 | 96 | 613 | 0 |
| HO629148 | 530 | 87 | 615 | 0 |
| HO778340 | 398 | 60 | 455 | 0 |
| CN831271 | 382 | 234 | 615 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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