| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01028040001 |
| Family | CE8 |
| Protein Properties | Length: 567 Molecular Weight: 61517.1 Isoelectric Point: 7.0572 |
| Chromosome | Chromosome/Scaffold: 7 Start: 3356154 End: 3358272 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 253 | 548 | 0 |
| VTVNQDGSGNFATINDAIAVAPNNTDGSNGYFVIYIQAGVYEEYVSIAKNKKYLMMIGDGINQTVITGNRSVVDGWTTFNSATFAVVAQGFVAVNITFRN TAGAAKHQAVALRSGADLSTFYLCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPLSGQFNAITAQGRTDPNQNTGTSIHNCV IRAADDLAASNGTTKTYLGRPWKEYSRTVYMQSNMGSLINPSGWSIWSGDFALSTLYYAEYNNTGPGSNTSNRVTWSGYHVIGPSDAANFTVGNFL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 567 Download |
| MEVDFTIQTP QVFSTKIKLI RITQPPYVSQ IFYIMASTIM QHSPSTHRLS LSPSLYSMTM 60 SSSKLSLSLV AFSAIVIFLA LFSSTSLADD SICQSTPDPS SCKGLVQSNK SANVYDYGRS 120 SLKKSIATSR KFLSLVDKYL SARSNLSAAA VRALQDCRFL GGLNLDYLLS SSQVADANSK 180 ILSVLEADDV QTLLSALLTN QQTCLDGLQE TSSSWSVKNG VSTPLQNRKL YESLSNRKLL 240 DTGNDQVSIS DIVTVNQDGS GNFATINDAI AVAPNNTDGS NGYFVIYIQA GVYEEYVSIA 300 KNKKYLMMIG DGINQTVITG NRSVVDGWTT FNSATFAVVA QGFVAVNITF RNTAGAAKHQ 360 AVALRSGADL STFYLCSFEA YQDTLYTHSL RQFYRECDIY GTVDFIFGNA AVVFQNCNLY 420 PRLPLSGQFN AITAQGRTDP NQNTGTSIHN CVIRAADDLA ASNGTTKTYL GRPWKEYSRT 480 VYMQSNMGSL INPSGWSIWS GDFALSTLYY AEYNNTGPGS NTSNRVTWSG YHVIGPSDAA 540 NFTVGNFLLG GDWLPQTGVP YTGGLL* 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02314 | PLN02314 | 1.0e-156 | 91 | 565 | 523 | + pectinesterase | ||
| PLN02301 | PLN02301 | 6.0e-162 | 70 | 565 | 537 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 0 | 73 | 566 | 557 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN03043 | PLN03043 | 0 | 93 | 566 | 534 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| pfam01095 | Pectinesterase | 0 | 253 | 550 | 299 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI36882.1 | 0 | 1 | 566 | 1 | 566 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002268492.1 | 0 | 58 | 565 | 1 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002302726.1 | 0 | 65 | 566 | 1 | 558 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002320332.1 | 0 | 83 | 566 | 30 | 560 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523112.1 | 0 | 81 | 566 | 23 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 253 | 565 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 255 | 565 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-25 | 263 | 555 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-25 | 263 | 555 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-25 | 263 | 555 | 18 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
