| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01028041001 |
| Family | CE8 |
| Protein Properties | Length: 550 Molecular Weight: 60524.2 Isoelectric Point: 9.5827 |
| Chromosome | Chromosome/Scaffold: 7 Start: 3365104 End: 3368302 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 251 | 451 | 0 |
| LTVAKDGSGDFTTIGEAIAAAPNSSTTRFVIHIKAGAYFEYLDIARSKTMLMLVGDGLENTYIKGNRSVGGGWTTFQSGTVAVVANNFIAKGISFENYAG PSNHQAVALRSGADLSVFYLCRFIGYQDTLYVHSLRQFYRECDVYGTIDFIFGNAAVVLQNCNLYARRPNANQKNVFTAQGRDDPNENTGISIQNCKVAA A | |||
| Full Sequence |
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| Protein Sequence Length: 550 Download |
| MDTSHKPLPC SKRKITRAKF LLSLLSISAF AFLLLTTVKP LKKSPKNTEI PQLHLHKHVQ 60 IAHSHCEGTL YPELCVSTLS TFPDLASKTV PEVIAATVSH TVGEVKLSAS NCSGIRRKLK 120 NLNTLEGRAI NDCLELHDCT IAQLQSTISD LSHNNSPAKH YHDLQTLLSG SITNLYTCLD 180 GFAYSKKHIR SSIEGPLRNI SHHVSNSLAM LKKIPGIFPE YGSTKDGFPA WLSGKDRRLL 240 QASASQIHYN LTVAKDGSGD FTTIGEAIAA APNSSTTRFV IHIKAGAYFE YLDIARSKTM 300 LMLVGDGLEN TYIKGNRSVG GGWTTFQSGT VAVVANNFIA KGISFENYAG PSNHQAVALR 360 SGADLSVFYL CRFIGYQDTL YVHSLRQFYR ECDVYGTIDF IFGNAAVVLQ NCNLYARRPN 420 ANQKNVFTAQ GRDDPNENTG ISIQNCKVAA AADLIPWDGD FALSTLYYGE YKNRGPGSNT 480 SGRVTWPGYR VINSSSVANC SKRLRISSSS KMSRYLIAPL NLYSIKKCVD VFFIKQKHFF 540 LIFFTSIQV* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02484 | PLN02484 | 6.0e-139 | 47 | 499 | 503 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 1.0e-140 | 56 | 498 | 483 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 2.0e-147 | 66 | 499 | 510 | + Probable pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-153 | 250 | 499 | 287 | + Pectinesterase. | ||
| PLN02933 | PLN02933 | 1.0e-161 | 87 | 498 | 460 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACQ85264.1 | 0 | 52 | 499 | 45 | 539 | pectin methylesterase [Musa acuminata AAA Group] |
| EMBL | CBI36883.1 | 0 | 1 | 549 | 1 | 549 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002271665.1 | 0 | 17 | 499 | 7 | 538 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301486.1 | 0 | 122 | 498 | 3 | 423 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523113.1 | 0 | 49 | 499 | 36 | 531 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 244 | 498 | 2 | 293 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 250 | 498 | 4 | 289 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 1e-23 | 249 | 456 | 4 | 235 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 1e-23 | 249 | 456 | 4 | 235 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 1e-23 | 249 | 456 | 4 | 235 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Transmembrane Domains | ||||
|---|---|---|---|---|
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| Start | End | |||
| 20 | 38 | |||
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| HO778758 | 450 | 94 | 498 | 0 |
| EC935091 | 268 | 47 | 307 | 0 |
| CB978036 | 270 | 86 | 348 | 0 |
| FQ430455 | 250 | 36 | 278 | 0 |
| FQ422852 | 250 | 36 | 278 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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