| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01028104001 |
| Family | GH3 |
| Protein Properties | Length: 769 Molecular Weight: 82582.1 Isoelectric Point: 8.1867 |
| Chromosome | Chromosome/Scaffold: 7 Start: 3841351 End: 3845412 |
| Description | beta-xylosidase 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH3 | 75 | 322 | 0 |
| AGVPRLGIKGYEWWSEALHGVSNVGPGTKFSGDFPGATSFPQVITTAASFNSSLWEAIGQVVSDEARAMYNGGAAGLTFWSPNVNIFRDPRWGRGQETPG EDPVLAGKYAARYVRGLQGNAGDRLKVAACCKHFTAYDLDNWNGVDRFHFDARVSKQEMEDTFDVPFRSCVVEGKVASVMCSYNQVNGVPTCADPNLLRN TVRKQWHLNGYVVSDCDSVGVFYDNQHYTNTPEEAAADAIKAGLDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 769 Download |
| MDSTTTPSSS LLIFLVVLAV VSGEARDPFA CDPKDGANAG FPFCRKSIGI GERVKDLIGR 60 LTLEEKVRLL VNNAAGVPRL GIKGYEWWSE ALHGVSNVGP GTKFSGDFPG ATSFPQVITT 120 AASFNSSLWE AIGQVVSDEA RAMYNGGAAG LTFWSPNVNI FRDPRWGRGQ ETPGEDPVLA 180 GKYAARYVRG LQGNAGDRLK VAACCKHFTA YDLDNWNGVD RFHFDARVSK QEMEDTFDVP 240 FRSCVVEGKV ASVMCSYNQV NGVPTCADPN LLRNTVRKQW HLNGYVVSDC DSVGVFYDNQ 300 HYTNTPEEAA ADAIKAGLDL DCGPFLAVHT QDAIKKGLVS EADVDSALVN TVTVQMRLGM 360 FDGEPSAQPF GDLGPKDVCS PAHQELAIEA ARQGIVLLKN HGHSLPLSTR SHRSIAVIGP 420 NSDANVTMIG NYAGIPCEYT TPLQGIGRYS RTIHQKGCAD VACSEDQLFA GAIDAASQAD 480 ATVLVMGLDQ SIEAEAKDRA DLLLPGRQQE LVSKVAMASR GPTVLVLMSG GPVDVSFAKK 540 DPRIAAIVWA GYPGQAGGAA IADILFGVAN PGGKLPMTWY PQEYLSKVPM TTMAMRAIPS 600 KAYPGRTYRF YKGPVVYRFG HGLSYTNFVH TIAQAPTAVA IPLHGHHNTT VSGKAIRVTH 660 AKCNRLSIAL HLDVKNVGNK DGSHTLLVFS KPPAGHWAPH KQLVAFEKVH VAARTQQRVQ 720 INIHVCKYLS VVDRSGIRRI PMGQHGLHIG DTKHLVSLQA AALGVIKS* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1472 | BglX | 2.0e-55 | 72 | 458 | 393 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam01915 | Glyco_hydro_3_C | 5.0e-58 | 395 | 626 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-65 | 62 | 354 | 323 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PRK15098 | PRK15098 | 1.0e-74 | 112 | 723 | 669 | + beta-D-glucoside glucohydrolase; Provisional | ||
| PLN03080 | PLN03080 | 0 | 10 | 760 | 776 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG10624.1 | 0 | 11 | 768 | 7 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
| RefSeq | NP_563659.1 | 0 | 11 | 768 | 12 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
| RefSeq | XP_002270249.1 | 0 | 1 | 768 | 1 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002276351.1 | 0 | 24 | 768 | 22 | 769 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002515300.1 | 0 | 22 | 768 | 21 | 768 | Beta-glucosidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 112 | 723 | 91 | 696 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 3u48_A | 0 | 112 | 723 | 91 | 696 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 3u4a_B | 0 | 112 | 723 | 91 | 696 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 3u4a_A | 0 | 112 | 723 | 91 | 696 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| PDB | 2x41_A | 1.4013e-45 | 52 | 711 | 2 | 661 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| (1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
