| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01028264001 |
| Family | CE8 |
| Protein Properties | Length: 402 Molecular Weight: 44747.4 Isoelectric Point: 10.266 |
| Chromosome | Chromosome/Scaffold: 7 Start: 5026786 End: 5031256 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 89 | 384 | 0 |
| AIVAKDGSGHFTTIAAALAAYPKNLKGRYVIYVKAGIYREYITVTKDHVNVYMYGDGPRKTIVTGTKCYRDGITTYKTATFSAIGKGFVARSMGFVNTAG PDGHQAVALRVQSDMSAFFNCRMDGYQDTLYVQAHRQFYRNCVISGTIDFIFGDSTTVIQNSLIIVRRPNDKQQNTVTAQGKTEKRETTGLVIHDCRIVP EQKLFPDRFKIPSFLGRPWKPYSKTIIMETTLGDFIQPAGWTPWAGKFVPNTLLYAEYGNLGPGANTHSRVTWKGYRIIKTRNEALQYTVNSFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 402 Download |
| MLASRRGDIH SRESAMQTGS SCLAERGINK GTKMIGKAVV SGISLFLPNS RRLLGEIEVL 60 GHDGYPTWFS ATDRKLLALQ DNGRLTPNAI VAKDGSGHFT TIAAALAAYP KNLKGRYVIY 120 VKAGIYREYI TVTKDHVNVY MYGDGPRKTI VTGTKCYRDG ITTYKTATFS AIGKGFVARS 180 MGFVNTAGPD GHQAVALRVQ SDMSAFFNCR MDGYQDTLYV QAHRQFYRNC VISGTIDFIF 240 GDSTTVIQNS LIIVRRPNDK QQNTVTAQGK TEKRETTGLV IHDCRIVPEQ KLFPDRFKIP 300 SFLGRPWKPY SKTIIMETTL GDFIQPAGWT PWAGKFVPNT LLYAEYGNLG PGANTHSRVT 360 WKGYRIIKTR NEALQYTVNS FIQGNLWLKQ INIPYLPGLK R* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02301 | PLN02301 | 7.0e-134 | 62 | 399 | 339 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02314 | PLN02314 | 5.0e-135 | 38 | 395 | 364 | + pectinesterase | ||
| PLN02468 | PLN02468 | 3.0e-138 | 51 | 399 | 349 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 2.0e-176 | 38 | 399 | 372 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 5.0e-178 | 88 | 385 | 298 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN67129.1 | 0 | 25 | 380 | 708 | 1075 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI37069.1 | 0 | 1 | 401 | 1 | 401 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274176.1 | 0 | 25 | 401 | 177 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275819.1 | 0 | 117 | 401 | 1 | 285 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 87 | 399 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 85 | 399 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-25 | 86 | 353 | 3 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-25 | 86 | 353 | 3 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-25 | 86 | 353 | 3 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EC951748 | 269 | 134 | 402 | 0 |
| EC935178 | 268 | 135 | 402 | 0 |
| EC955285 | 245 | 158 | 402 | 0 |
| GR194961 | 274 | 115 | 388 | 0 |
| EC955285 | 23 | 1 | 23 | 0.0008 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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