| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01028265001 |
| Family | CE8 |
| Protein Properties | Length: 262 Molecular Weight: 29554.9 Isoelectric Point: 10.3734 |
| Chromosome | Chromosome/Scaffold: 7 Start: 5031265 End: 5032609 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 1 | 244 | 0 |
| MYGDGPRKTIVTGTKSYRDGITTYKTATFSAIGKGFVARSMGFVNTAGPDGHQAVALRVQSDMSAIFNCRMDGYQDTLYIQAHRQFYRNCVISGTIDFIF GDSTTVIQNSLIIVRRPKDNQQNTVTAHGKAEKRETTGLVIHNCRIVPEQKLFPDRFKIPSFLGRPWKPYSKTIIMETTLGDFIQPAGWMPWAGDFALNT LFYAEYGNRGPGANTRSRVTWKGYRIIKTRNEALQYTVNSFIQG | |||
| Full Sequence |
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| Protein Sequence Length: 262 Download |
| MYGDGPRKTI VTGTKSYRDG ITTYKTATFS AIGKGFVARS MGFVNTAGPD GHQAVALRVQ 60 SDMSAIFNCR MDGYQDTLYI QAHRQFYRNC VISGTIDFIF GDSTTVIQNS LIIVRRPKDN 120 QQNTVTAHGK AEKRETTGLV IHNCRIVPEQ KLFPDRFKIP SFLGRPWKPY SKTIIMETTL 180 GDFIQPAGWM PWAGDFALNT LFYAEYGNRG PGANTRSRVT WKGYRIIKTR NEALQYTVNS 240 FIQGNLWLKQ INIPYLPSLK R* 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02713 | PLN02713 | 4.0e-105 | 1 | 259 | 259 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 6.0e-109 | 1 | 255 | 255 | + pectinesterase/pectinesterase inhibitor | ||
| PLN02468 | PLN02468 | 9.0e-113 | 1 | 259 | 259 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02745 | PLN02745 | 2.0e-139 | 1 | 254 | 254 | + Putative pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-152 | 1 | 245 | 245 | + Pectinesterase. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN67129.1 | 0 | 1 | 240 | 305 | 544 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI37069.1 | 0 | 1 | 261 | 141 | 401 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI37070.1 | 0 | 1 | 261 | 1 | 261 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274176.1 | 0 | 1 | 261 | 305 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275819.1 | 0 | 1 | 261 | 25 | 285 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 3 | 255 | 63 | 315 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 1 | 259 | 57 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 3e-18 | 53 | 213 | 129 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 3e-18 | 53 | 213 | 129 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 3e-18 | 53 | 213 | 129 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EC951748 | 262 | 1 | 262 | 0 |
| EC935178 | 262 | 1 | 262 | 0 |
| EC955285 | 245 | 18 | 262 | 0 |
| EC949167 | 215 | 48 | 262 | 0 |
| EC983977 | 199 | 64 | 262 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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