y
Basic Information | |
---|---|
Species | Vitis vinifera |
Cazyme ID | GSVIVT01028610001 |
Family | AA7 |
Protein Properties | Length: 633 Molecular Weight: 70347 Isoelectric Point: 7.0907 |
Chromosome | Chromosome/Scaffold: 7 Start: 10718957 End: 10722208 |
Description | cytokinin oxidase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA7 | 204 | 369 | 1.9e-22 |
DVLTAARGQGHSLRGQAMASHGVVVEMRSLNNCSCGSGIRVTKNPIWGSYADVGGEQQWIDVLQATLKHGLAPVSWTDYLYLTIGGTLSNAGISGQTFRH GPQISNVYEMDVLTGKGELVTCSKDTNSELFFAVLGGLGQFGIIIRARIALKPAPKRVKWIQMLYD |
Full Sequence |
---|
Protein Sequence Length: 633 Download |
MARSCPISTS FIIIIVLSHF TSSIGLRPWP DVLPNELQSL DIASRLRVDP DATRMASRDF 60 GKLVHPPNPA AVLYPSSIED IASLVKFSYN RSFPFSIAAR GQGHSLRGQA MAPHGVVVEM 120 RSLNNCSRGS GIRVTKNPIS GSYADAGGEQ LWIDVLQATL KHGLAPVSWT DYLYLTIGGT 180 LSNAGISGQT FRHGPQISNV YEMDVLTAAR GQGHSLRGQA MASHGVVVEM RSLNNCSCGS 240 GIRVTKNPIW GSYADVGGEQ QWIDVLQATL KHGLAPVSWT DYLYLTIGGT LSNAGISGQT 300 FRHGPQISNV YEMDVLTGKG ELVTCSKDTN SELFFAVLGG LGQFGIIIRA RIALKPAPKR 360 VKWIQMLYDD FSTFSRDQEH LISINGLDYL EGSLLMQNSS PNNWRSSFSP SEYPRISSLI 420 SKNGIIYCLE VVKYYDELTS HTVDEELQEL LKGLNFLPGF VFTKDVSLVD FLNRVHSEEL 480 NLQAKGLWDV PHPWLNLFVP GSRISDFNSG VFRDILPKIN QTTGTFLVYP VIRNKWDDRT 540 SAVIPDEDIF YTVGLLHSSG ADDWEPLENQ NKEILQFCDK AGIKIKRYLS RYTTKEDWMN 600 HFGPKWRTFE DRKAQFDPKL ILSPGQQIFN SI* 660 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0277 | GlcD | 4.0e-12 | 36 | 224 | 191 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
COG0277 | GlcD | 2.0e-21 | 209 | 628 | 431 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
PLN02441 | PLN02441 | 2.0e-102 | 2 | 213 | 212 | + cytokinin dehydrogenase | ||
pfam09265 | Cytokin-bind | 4.0e-139 | 358 | 629 | 281 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 0 | 208 | 632 | 432 | + cytokinin dehydrogenase |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN80714.1 | 0 | 1 | 208 | 1 | 208 | hypothetical protein [Vitis vinifera] |
EMBL | CAN80714.1 | 0 | 208 | 632 | 98 | 522 | hypothetical protein [Vitis vinifera] |
EMBL | CBI37295.1 | 0 | 1 | 632 | 1 | 632 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263754.1 | 0 | 1 | 208 | 1 | 208 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002263754.1 | 0 | 208 | 632 | 98 | 522 | PREDICTED: hypothetical protein [Vitis vinifera] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s1e_A | 0 | 208 | 630 | 81 | 516 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
PDB | 3s1e_A | 0 | 27 | 207 | 14 | 187 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
PDB | 3s1c_A | 0 | 208 | 630 | 81 | 516 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
PDB | 3s1c_A | 0 | 27 | 207 | 14 | 187 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
PDB | 3dq0_A | 0 | 208 | 630 | 81 | 516 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
cytokinins degradation | RXN-4621 | EC-1.5.99 | isopentenyladenine:FAD oxidoreductase |
cytokinins degradation | RXN-4661 | EC-1.5.99 | trans-zeatin:FAD oxidoreductase |