| Basic Information | |
|---|---|
| Species | Vitis vinifera |
| Cazyme ID | GSVIVT01029033001 |
| Family | GT14 |
| Protein Properties | Length: 433 Molecular Weight: 47724.3 Isoelectric Point: 8.4546 |
| Chromosome | Chromosome/Scaffold: 5 Start: 10988736 End: 10994229 |
| Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT14 | 86 | 342 | 0 |
| LAYFISGSAGDSHKILRLLFAAYHPRNHYLLHLDLTAPQSDRDRLALAVQSVPVFRAARNVNVMGKADFAYGKGSSSISSTLHGASILLRLSSSWDWFIN LSASDYPLVTQDDLLHILSFVPRDLNFVNHTSYIGWRESRKLKPIIVDPGLYLTQKTEIFYATQKRGLPNSFQLFTGSSSAILNRAFIEFCIVGTDNLPR TLLMYLANTPSSLPNYFPTILCNSRQFNKTIVNHNLQYASFDKPAKEEPRRLGSKDF | |||
| Full Sequence |
|---|
| Protein Sequence Length: 433 Download |
| MQNSHQPPFP ISGTTAAALT KDNRSFYLII ATSFVSLLFI LSLSATSPPA PSAPATDPYL 60 FPTSHHRHPI FLNPNPSDST PTPPSLAYFI SGSAGDSHKI LRLLFAAYHP RNHYLLHLDL 120 TAPQSDRDRL ALAVQSVPVF RAARNVNVMG KADFAYGKGS SSISSTLHGA SILLRLSSSW 180 DWFINLSASD YPLVTQDDLL HILSFVPRDL NFVNHTSYIG WRESRKLKPI IVDPGLYLTQ 240 KTEIFYATQK RGLPNSFQLF TGSSSAILNR AFIEFCIVGT DNLPRTLLMY LANTPSSLPN 300 YFPTILCNSR QFNKTIVNHN LQYASFDKPA KEEPRRLGSK DFDDMIQSGA AFATQFRLND 360 VALDRIDQEI LGRSPGKILP GGWCLGEAGN DTCSVWGDAD VLRPGPGAKR LEKRIAELLS 420 DGTFQAHQCI VE* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02485 | Branch | 3.0e-64 | 86 | 346 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
| PLN03183 | PLN03183 | 4.0e-137 | 87 | 429 | 343 | + acetylglucosaminyltransferase family protein; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAS99698.1 | 0 | 57 | 432 | 50 | 417 | At3g24040 [Arabidopsis thaliana] |
| EMBL | CAN80510.1 | 0 | 1 | 432 | 1 | 459 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002282998.1 | 0 | 1 | 432 | 1 | 432 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002299292.1 | 0 | 26 | 432 | 24 | 428 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518166.1 | 0 | 57 | 432 | 67 | 438 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3otk_D | 0.0000002 | 82 | 287 | 78 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_C | 0.0000002 | 82 | 287 | 78 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_B | 0.0000002 | 82 | 287 | 78 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 3otk_A | 0.0000002 | 82 | 287 | 78 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
| PDB | 2gam_D | 0.0000006 | 82 | 287 | 78 | 272 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
