PlantCAZyme

CAZyme Information

Basic Information
Species	Vitis vinifera
Cazyme ID	GSVIVT01029623001
Family	GH47
Protein Properties	Length: 344 Molecular Weight: 38896.2 Isoelectric Point: 6.1035
Chromosome	Chromosome/Scaffold: 9 Start: 20565634 End: 20573112
Description	alpha-mannosidase 1
View CDS

External Links
NCBI Taxonomy
Plaza
CAZyDB

External Links

NCBI Taxonomy

Plaza

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH47	9	314	0
LSHGNAHNPGWTGGDSILADSGTEQLEFIALSQRTGDPKYQKKVENVIIELNKTFPADGLLPIYINPHRGTSSYSTITFGAMGDSFYEYLLKVWIQGNKT ADVKHYREMWETSMKGLLSLVRRTTSSSFTYICEKNGDSLHDKMDGLACFAPGMIALGSLGYGPEESQKFLSLAEELAWTCYNFYQSTPTKLAGENYFFH SGQDMSVGTSWNILRPETVESLFYLWRLTGSKTYQEWGWNIFQAFEKNSRIESGYVGLKDVNRDVKDNMMQSFFLAETLKYLYLLFSPSSVISLDEWVFN TEAHPI

Full Sequence
Protein Sequence Length: 344 Download
MPQFTAKILS HGNAHNPGWT GGDSILADSG TEQLEFIALS QRTGDPKYQK KVENVIIELN 60 KTFPADGLLP IYINPHRGTS SYSTITFGAM GDSFYEYLLK VWIQGNKTAD VKHYREMWET 120 SMKGLLSLVR RTTSSSFTYI CEKNGDSLHD KMDGLACFAP GMIALGSLGY GPEESQKFLS 180 LAEELAWTCY NFYQSTPTKL AGENYFFHSG QDMSVGTSWN ILRPETVESL FYLWRLTGSK 240 TYQEWGWNIF QAFEKNSRIE SGYVGLKDVN RDVKDNMMQS FFLAETLKYL YLLFSPSSVI 300 SLDEWVFNTE AHPIGIMTRH DNSIGCMAGR KVGELMIRIL FLF* 360

Full Sequence

Protein Sequence Length: 344 Download

MPQFTAKILS HGNAHNPGWT GGDSILADSG TEQLEFIALS QRTGDPKYQK KVENVIIELN    60
KTFPADGLLP IYINPHRGTS SYSTITFGAM GDSFYEYLLK VWIQGNKTAD VKHYREMWET    120
SMKGLLSLVR RTTSSSFTYI CEKNGDSLHD KMDGLACFAP GMIALGSLGY GPEESQKFLS    180
LAEELAWTCY NFYQSTPTKL AGENYFFHSG QDMSVGTSWN ILRPETVESL FYLWRLTGSK    240
TYQEWGWNIF QAFEKNSRIE SGYVGLKDVN RDVKDNMMQS FFLAETLKYL YLLFSPSSVI    300
SLDEWVFNTE AHPIGIMTRH DNSIGCMAGR KVGELMIRIL FLF*                     360

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam01532	Glyco_hydro_47	9.0e-120	12	316	323	+ Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2).
PTZ00470	PTZ00470	2.0e-124	9	316	317	+ glycoside hydrolase family 47 protein; Provisional

Gene Ontology
GO Term	Description
GO:0004571	mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509	calcium ion binding
GO:0016020	membrane

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
GenBank	AAF16414.1	0	9	324	239	555	AF126550_1 mannosyl-oligosaccharide 1,2-alpha-mannosidase [Glycine max]
EMBL	CBI18472.1	0	9	322	234	547	unnamed protein product [Vitis vinifera]
EMBL	CBI18482.1	0	1	343	1	343	unnamed protein product [Vitis vinifera]
RefSeq	XP_002519409.1	0	9	322	221	534	mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis]
RefSeq	XP_002528166.1	0	9	321	186	499	mannosyl-oligosaccharide alpha-1,2-mannosidase, putative [Ricinus communis]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1nxc_A	0	17	324	163	473	A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases)
PDB	1fo3_A	0	12	318	143	458	A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases)
PDB	1fo2_A	0	12	318	143	458	A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase In Complex With 1-Deoxymannojirimycin
PDB	1fmi_A	0	12	318	143	458	A Chain A, Crystal Structure Of Human Class I Alpha1,2-Mannosidase
PDB	1x9d_A	0	12	318	221	536	A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

CU615093

316

338

GW895275

284

303

CF207910

256

322

EH734230

273

294

EH768908

273

319

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_018_00031.1	Aquca_018_00031.2	Aquca_018_00031.3	Aquca_125_00025.1	Aquca_125_00025.2
	Aquca_125_00025.3	Aquca_125_00025.4	Aquca_049_00074.1	Aquca_002_00310.1	Aquca_125_00025.5
	Aquca_002_00310.2
Arabidopsis lyrata	479633	474272	890537	494638	472957
Arabidopsis thaliana	AT3G21160.1	AT1G51590.1	AT1G51590.2	AT1G30000.1	AT5G43710.1
	AT1G27520.1
Brachypodium distachyon	Bradi5g20920.1	Bradi2g32570.1	Bradi2g51467.1	Bradi3g59640.1
Brassica rapa	Bra001816	Bra014291	Bra018917	Bra031256	Bra010804
	Bra032351	Bra032833	Bra035984
Carica papaya	evm.model.supercontig_95.2	evm.model.supercontig_166.13	evm.model.supercontig_95.1	evm.model.supercontig_67.12	evm.model.supercontig_110.19
	evm.model.supercontig_58.25
Capsella rubella	Carubv10008737m	Carubv10013330m	Carubv10008589m	Carubv10028673m	Carubv10008651m
Chlamydomonas reinhardtii	Cre07.g336600.t2.1	Cre07.g336600.t1.3	Cre06.g301600.t1.3.289.614	Cre06.g301600.t1.3.289.614	Cre06.g301600.t1.3.61.154
	Cre06.g301600.t1.3.61.154
Citrus clementina	Ciclev10025230m	Ciclev10014607m	Ciclev10019471m	Ciclev10004553m
Citrus sinensis	orange1.1g008341m	orange1.1g008300m	orange1.1g008122m	orange1.1g047597m
Cucumis sativus	Cucsa.359580.9	Cucsa.359580.8	Cucsa.359580.1	Cucsa.047700.1	Cucsa.197180.1
	Cucsa.254850.1	Cucsa.197180.2
Eucalyptus grandis	Eucgr.F04021.3	Eucgr.F04021.2	Eucgr.F04021.1	Eucgr.C00102.1	Eucgr.D00298.2
	Eucgr.D00298.1	Eucgr.B00341.1	Eucgr.H00217.1	Eucgr.D00298.3.295.528	Eucgr.D00298.3.295.528
	Eucgr.D00298.3.92.294	Eucgr.D00298.3.92.294
Fragaria vesca	mrna30596.1-v1.0-hybrid	mrna05270.1-v1.0-hybrid.98.305	mrna05270.1-v1.0-hybrid.98.305	mrna17280.1-v1.0-hybrid.95.302	mrna17280.1-v1.0-hybrid.95.302
	mrna05270.1-v1.0-hybrid.306.507	mrna05270.1-v1.0-hybrid.306.507	mrna17280.1-v1.0-hybrid.303.483	mrna17280.1-v1.0-hybrid.303.483	mrna32588.1-v1.0-hybrid
	mrna09481.1-v1.0-hybrid.43.302	mrna09481.1-v1.0-hybrid.43.302	mrna29049.1-v1.0-hybrid	mrna09481.1-v1.0-hybrid.302.439	mrna09481.1-v1.0-hybrid.302.439
Glycine max	Glyma07g02290.1	Glyma08g23730.1	Glyma17g06600.2	Glyma17g06600.1	Glyma13g00470.2
	Glyma15g10130.1	Glyma13g28910.1	Glyma13g28910.2	Glyma05g01830.1	Glyma10g32320.1
	Glyma17g10060.1	Glyma17g10060.3	Glyma17g10060.2	Glyma05g22295.1	Glyma20g35290.1
Gossypium raimondii	Gorai.005G122200.2	Gorai.005G122200.1	Gorai.011G003500.6	Gorai.011G003500.2	Gorai.011G003500.1
	Gorai.011G003500.3	Gorai.011G003500.4	Gorai.011G003500.5	Gorai.010G238600.1	Gorai.009G155100.5
	Gorai.009G155100.2	Gorai.009G155100.1	Gorai.009G155100.4	Gorai.009G155100.3	Gorai.006G187900.2
	Gorai.006G187900.1	Gorai.006G245800.2	Gorai.006G245800.1	Gorai.006G187900.3	Gorai.006G187900.4
Linum usitatissimum	Lus10034820	Lus10035727	Lus10037312	Lus10042830	Lus10033368.153.381
	Lus10033368.153.381	Lus10028127	Lus10042143	Lus10033368.428.563	Lus10033368.428.563
	Lus10041170	Lus10021888.49.301	Lus10021888.49.301	Lus10004233	Lus10021888.303.456
	Lus10021888.303.456
Malus domestica	MDP0000857857	MDP0000308427	MDP0000143766	MDP0000156362.354.619	MDP0000156362.354.619
	MDP0000167309	MDP0000316328	MDP0000156362.225.356	MDP0000156362.225.356	MDP0000268730.351.588
	MDP0000268730.351.588	MDP0000268730.596.800	MDP0000268730.596.800	MDP0000230215	MDP0000208346
	MDP0000245188.48.176	MDP0000245188.48.176	MDP0000319401.48.275	MDP0000319401.48.275	MDP0000319401.311.449
	MDP0000319401.311.449	MDP0000245188.210.319	MDP0000245188.210.319	MDP0000222952
Manihot esculenta	cassava4.1_026203m	cassava4.1_003593m	cassava4.1_003599m	cassava4.1_011906m	cassava4.1_015511m
	cassava4.1_003747m	cassava4.1_004429m
Medicago truncatula	Medtr4g127310.1	Medtr2g019520.2	Medtr2g019520.1	Medtr2g019520.3	Medtr4g106370.1
	Medtr1g093270.1
Mimulus guttatus	mgv1a003772m	mgv1a002872m	mgv1a025048m	mgv1a002884m
Oryza sativa	LOC_Os04g51690.1	LOC_Os05g11850.1	LOC_Os01g56670.1	LOC_Os01g56670.3	LOC_Os01g56670.2
	LOC_Os02g50780.1	LOC_Os01g56670.4
Panicum virgatum	Pavirv00024177m	Pavirv00056286m	Pavirv00057415m	Pavirv00052269m	Pavirv00016853m
	Pavirv00054954m	Pavirv00016455m	Pavirv00000605m	Pavirv00017739m
Physcomitrella patens	Pp1s387_34V6.1	Pp1s16_48V6.1	Pp1s58_280V6.1	Pp1s313_34V6.1
Phaseolus vulgaris	Phvul.008G254800.1	Phvul.003G140700.1	Phvul.006G164400.1	Phvul.003G197300.1	Phvul.007G109800.1
	Phvul.006G033000.1	Phvul.011G127200.1
Picea abies	MA_10430881g0010	MA_10426596g0010	MA_311901g0010	MA_10180832g0010	MA_170877g0010
	MA_8281735g0010	MA_118584g0010
Populus trichocarpa	Potri.018G141100.2	Potri.018G141100.1	Potri.008G007500.1	Potri.008G007500.2	Potri.018G141100.3
	Potri.018G141100.4	Potri.004G132300.1	Potri.004G132300.2	Potri.004G132300.4	Potri.004G132300.3
	Potri.015G071400.1	Potri.012G076600.1	Potri.008G160900.1	Potri.015G071400.2	Potri.012G076600.2
Prunus persica	ppa004310m	ppa026880m	ppa002795m	ppa003534m	ppa002909m
	ppa012357m
Ricinus communis	28359.m000280	30063.m001451	29693.m002021	30147.m014004	29844.m003177
Setaria italica	Si013487m	Si009718m	Si021445m	Si016751m	Si004250m
Selaginella moellendorffii	101351	85111	168485	92622	229806
	228194
Sorghum bicolor	Sb06g027810.1	Sb09g006500.1	Sb03g036080.1	Sb04g028330.1
Thellungiella halophila	Thhalv10011358m	Thhalv10020383m	Thhalv10007084m	Thhalv10003168m	Thhalv10007201m
Vitis vinifera	GSVIVT01029601001	GSVIVT01029306001	GSVIVT01021446001	GSVIVT01007818001	GSVIVT01018097001
	GSVIVT01029609001
Volvox carteri	Vocar20012263m

Orthologous Group

Species

Aquilegia coerulea